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Nathan Goodyear

Depression, antidepressant medications, and risk of Clostridium difficileinfection | BM... - 0 views

bmcmedicine.biomedcentral.com/...1741-7015-11-121

depression anti-depressants C difficile clostridium difficile

shared by Nathan Goodyear on 01 Jun 16 - No Cached
  • Nathan Goodyear on 01 Jun 16
     
    PPI therapies, histamine (specifically type II) antagonists and antidepressants are associated with clostridium difficile infection. 
Nathan Goodyear

Clostridium scindens: a human gut microbe with a high potential to convert glucocortico... - 0 views

www.jlr.org/...2437.full

gut microbiota gut microbiome gut bacteria androgens hormones clostridium scindens

shared by Nathan Goodyear on 29 Apr 15 - No Cached
  • During the enterohepatic circulation (EC), bile salts are synthesized in the liver, concentrated in the gallbladder, and function in the lumen of the small intestine to absorb dietary lipids and limit microbial growth at the site of nutrient uptake
  • Bile acid 7α/β-dehydroxylating bacteria are organisms capable of converting primary bile acids made by the host to harmful secondary bile acids, deoxycholic acid, and lithocholic acid
  • These bacteria normally comprise a small proportion of the gut microbiota (∼103–104/g wet weight) and consist of species within the genus Clostridium
  • ...3 more annotations...
  • C. scindens and a small number of species belonging to the genus Clostridium are responsible for significant alterations in the human bile acid pool composition through bile acid 7α/β dehydroxylation
  • bile acids play an important role in maintaining intestinal barrier function as antimicrobial agents in the small bowel (37, 38) and inducers of antimicrobial peptides
  • Perturbations in the biliary bile acid pool composition can be indicative of hepatogastrointestinal diseases such as fat malabsorption (40), gallstones (3), gastrointestinal cancers (41), and possibly type II diabetes
  • Nathan Goodyear on 29 Apr 15
     
    Gut microbiota appears to be source of androgen production that originates from the gut.  Who would have thought that the Gut as an androgen producing endocrine gland.
Nathan Goodyear

Influence of mode of delivery on gut microbiota composition in seven year old children ... - 0 views

gut.bmj.com/...1388.2.full

delivery allergies atopy mode of gut dysbiosis microbiota flora children bifidobacterium clostridium IgE

shared by Nathan Goodyear on 05 Apr 12 - No Cached
  • Nathan Goodyear on 05 Apr 12
     
    fascinating read.  This study looked at the mode of delivery and found that the balance of bifidobacterium and clostridium gut microbiota was altered by mode of delivery.  This has been associated with excessive IgE antibody production.  Ever wonder why we have so many allergies today?  Maybe it is because of the doctors rush to perform Ceserean Sections.
Nathan Goodyear

BMC Microbiology | Full text | The Firmicutes / Bacteroidetes ratio of the human microb... - 0 views

www.biomedcentral.com/...123

gut flora gut microbiome gut microbiota firmicutes bacteroidetes firmicutes_bacteroidetes health gut microbiome

shared by Nathan Goodyear on 06 May 15 - No Cached
  • The microbiota of the large intestine plays an important role in host metabolism and maintenance of host health
  • Our results defining a standard adult profile, together with previous reports, showed that C. leptum, C. coccoides, Bacteroides and Bifidobacterium represent the four dominant groups of the adult fecal microbiota
  • Sub-dominant groups are Lactobacilli Enterobacteriaceae, Desulfovibrio, Sporomusa, Atopobium as well as other bacterial groups including Clostridium clusters XI, XIVb, and XVIII
  • ...12 more annotations...
  • In infant fecal microbiota, we observed Bifidobacterium as the dominant group
  • this observation is strongly related to diet, being enhanced by breast feeding
  • Significant higher numbers of Bifidobacterium were observed in infants versus adults and seniors
  • the gastrointestinal tract is first colonized by facultative anaerobes, such as E. coli
  • Strict anaerobes, such as Clostridium, colonize at later stages, as can be seen by the relatively low levels of C. leptum and C. coccoides in infants
  • diet change must be considered among the primary causes for such a shift of microbiota between infants and adults.
  • In the case of elderly subjects, our qPCR results indicated a significant increase in the counts of E. coli when compared to adults. This data is consistent with other publications indicating that elderly subjects harbor a different E. coli microbiota profile compared to younger adults
  • a number of authors reported a reduction in the numbers and diversity of many protective commensal anaerobes, such as Bacteroides and Bifidobacteria
  • The Firmicutes to Bacteroidetes ratio was already shown to be of significant relevance in signaling human gut microbiota status
  • Our measurements of the Firmicutes/Bacteroidetes ratio in adults obtained by our species-specific qPCR are in agreement with those obtained by Ley et al
  • Compared with young adults, the elderly have a different digestive physiology, characterized at a physiological level by a reduction in transit and of digestive secretions
  • The Firmicutes/Bacteroidetes ratio undergoes an increase from birth to adulthood and is further altered with advanced age
  • Nathan Goodyear on 06 May 15
     
    Good discussion of the gut microbiome.  Age effects the gut bacteria balance.  The Firmicutes/Bacteroidetes ratio increases from young, to young adult, to the elderly in this study.  Is this simply a reflection of aging or is the a biomarker that can be changed through diet and targeted probiotics?
Nathan Goodyear

The Firmicutes/Bacteroidetes ratio of the human microbiota changes with age | BMC Micro... - 0 views

bmcmicrobiol.biomedcentral.com/...1471-2180-9-123

gut gut health gut flora gut microbiota firmicutes_bacteroidetes metabolism

shared by Nathan Goodyear on 09 Nov 16 - No Cached
  • C. leptum, C. coccoides, Bacteroides and Bifidobacterium represent the four dominant groups of the adult fecal microbiota
  • Lactobacilli Enterobacteriaceae, Desulfovibrio, Sporomusa, Atopobium as well as other bacterial groups including Clostridium clusters XI, XIVb, and XVIII
  • The Firmicutes/Bacteroidetes ratio undergoes an increase from birth to adulthood and is further altered with advanced age
  • Nathan Goodyear on 09 Nov 16
     
    good review/discussion of gut microbiota, including the firmicutes:bacteroidetes ratio.
Nathan Goodyear

Autism and Clostridium Tetani - 0 views

www.ncbi.nlm.nih.gov/pubmed

ASD autism metabolic endotoxemia children inflammation dysbiosis gut flora microbiota

shared by Nathan Goodyear on 30 Jan 12 - No Cached
  • Nathan Goodyear on 30 Jan 12
     
    Dysbiosis is commonly found in children with ASD. Antibiotics disrupt the normal gut microbiota resulting in dysbiosis. This imbalance in gut bacteria is now known to cause systemic inflammatory states such as metabolic endotoxemia. There is no reason to think a similar link may be present between Gut inflammation and ASD
Nathan Goodyear

Normal Flora - Medical Microbiology - NCBI Bookshelf - 0 views

www.ncbi.nlm.nih.gov/...NBK7617

flora gut flora gut microbiome gut microbiota

shared by Nathan Goodyear on 05 May 15 - No Cached
  • Concentrations of 109 to 1011 bacteria/g of contents are frequently found in human colon
  • more than 400 species have been identified
  • 95 to 99 percent belong to anaerobic genera such as Bacteroides, Bifidobacterium, Eubacterium, Peptostreptococcus, and Clostridium
  • ...2 more annotations...
  • hese genera proliferate, occupy most available niches, and produce metabolic waste products such as acetic, butyric, and lactic acids
  • Anaerobic bacteria can then deconjugate bile acids in this region and bind available vitamin B12 so that the vitamin and fats are malabsorbed
  • Nathan Goodyear on 05 May 15
     
    normal flora of the body
Nathan Goodyear

Diet-Induced Dysbiosis of the Intestinal Microbiota and the Effects on Immunity and Dis... - 0 views

www.ncbi.nlm.nih.gov/...PMC3448089

dysbiosis diet nutrition metabolic endotoxemia disease inflammation gut

shared by Nathan Goodyear on 27 Jul 14 - No Cached
  • The gut microbiota participates in the body’s metabolism by affecting energy balance, glucose metabolism, and low-grade inflammation associated with obesity and related metabolic disorders
  • Firmicutes and Bacteroidetes represent the two largest phyla in the human and mouse microbiota and a shift in the ratio of these phyla has been associated with many disease conditions, including obesity
  • In obese humans, there is decreased abundance of Bacteroidetes compared to lean individuals
  • ...21 more annotations...
  • weight loss in obese individuals results in an increase in the abundance of Bacteroidetes
  • there is conflicting evidence on the composition of the obese microbiota phenotype with regards to Bacteroidetes and Firmicutes ratios
  • Bifidobacteria spp. from the phyla Actinobacteria, has been shown to be depleted in both obese mice and human subjects
  • While it is not yet clear which specific microbes are inducing or preventing obesity, evidence suggests that the microbiota is a factor.
  • targeted manipulation of the microbiota results in divergent metabolic outcomes depending on the composition of the diet
  • The microbiota has been linked to insulin resistance or type 2 diabetes (T2D) via metabolic syndrome and indeed the microbiota of individuals with T2D is also characterized by an increased Bacteroidetes/Firmicutes ratio, as well as an increase in Bacillus and Lactobacillus spp
  • It was also observed that the ratio of Bacteriodes-Prevotella to C. coccoides-E. rectale positively correlated with glucose levels but did not correlate with body mass index [80]. This suggests that the microbiota may influence T2D in conjunction with or independently of obesity
  • In humans, high-fat Western-style diets fed to individuals over one month can induce a 71% increase in plasma levels of endotoxins, suggesting that endotoxemia may develop in individuals with GI barrier dyfunction connected to dysbiosis
  • LPS increases macrophage infiltration essential for systemic inflammation preceding insulin resistance, LPS alone does not impair glucose metabolism
  • early treatment of dysbiosis may slow down or prevent the epidemic of metabolic diseases and hence the corresponding lethal cardiovascular consequences
  • increased Firmicutes and decreased Bacteroidetes, which is the microbial profile found in lean phenotypes, along with an increase in Bifidobacteria spp. and Lactobacillus spp
  • mouse and rat models of T1D have been shown to have microbiota marked by decreased diversity and decreased Lactobacillus spp., as well as a decrease in the Firmicutes/Bacteroidetes ratio
  • microbial antigens through the innate immune system are involved in T1D progression
  • The microbiota appears to be essential in maintaining the Th17/Treg cell balance in intestinal tissues, mesenteric and pancreatic lymph nodes, and in developing insulitis, although progression to overt diabetes has not been shown to be controlled by the microbiota
  • There is evidence that dietary and microbial antigens independently influence T1D
  • Lactobacillus johnsonii N6.2 protects BB-rats from T1D by mediating intestinal barrier function and inflammation [101,102] and a combination probiotic VSL#3 has been shown to attenuate insulitis and diabetes in NOD mice
  • breast fed infants have higher levels of Bifidobacteria spp. while formula fed infants have higher levels of Bacteroides spp., as well as increased Clostridium coccoides and Lactobacillus spp
  • the composition of the gut microbiota strongly correlates with diet
  • In mice fed a diet high in fat, there are many key gut population changes, such as the absence of gut barrier-protecting Bifidobacteria spp
  • diet has a dominating role in shaping gut microbiota and changing key populations may transform healthy gut microbiota into a disease-inducing entity
  • “Western” diet, which is high in sugar and fat, causes dysbiosis which affects both host GI tract metabolism and immune homeostasis
  • Nathan Goodyear on 27 Jul 14
     
    Nice discussion of how diet, induces gut bacterial change, that leads to metabolic endotoxemia and disease.
Nathan Goodyear

Distinct composition of gut microbiota during pregnancy in overweight and normal-weight... - 0 views

www.ajcn.org/...894.abstract

obesity gut pregnancy microbiota bacteroidetes clostridium staphylococcus

shared by Nathan Goodyear on 02 Sep 11 - No Cached
  • Nathan Goodyear on 02 Sep 11
     
    the gut bacterial balance in overweight women is distinctly different than normal weight women during pregnancy.  We know that bacterial balance in the infants plays a pivotal role in obesity risk.  Maybe, probiotic and gut health in the pregnant mother is the starting point to preventing obesity risk in children
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