Skip to main content

Home/ Honors Scientific Research 2023-2024/ Group items tagged structure

Rss Feed Group items tagged

Sean Nash

Microwaving an insecticide restores its mosquito-killing power - 2 views

  • Heating an insecticide can give it new life.
    • Sean Nash
       
      Wait, what? Do say more.....
  • Microwaving the insecticide deltamethrin rearranges its crystal structure but doesn’t change its chemical composition. The rearrangement renews deltamethrin’s ability to kill mosquitoes that have become resistant to the insecticide, researchers report April 21 in Malaria Journal.
    • Sean Nash
       
      Hmmmm... something similar to this smells like: feasibility.
  • The microwave worked just as well, but Kahr cautions that people shouldn’t use the same microwave for heating food and insecticides.
    • Sean Nash
       
      Ha! No kidding??
  • ...6 more annotations...
  • insecticide resistance is a growing problem
  • It is encouraging that heated insecticide killed highly resistant mosquitoes, says Hemingway, who directs the Infection Innovation Consortium, a public-private effort to find new ways to combat infectious diseases. But, she says, “this is not something we can take and use that tomorrow.”
    • Sean Nash
       
      OK.... this is how you can find an opening (not saying THIS ONE is necessarily, but, when you see language like: "we can't really do it just yet," that is a screaming opportunity to see what we MIGHT be able to add to that.
  • It’s not certain that the heat-treated deltamethrin would retain its more potent crystal structure through the net-making process.
  • Kahr’s team is working on incorporating the heat-treated crystal into nets.
  • “There are all kinds of social and cultural things that you could propose from a scientific perspective that wouldn’t be welcomed by a community of homeowners.”
    • Sean Nash
       
      Again... this reads: "potential research opportunity."
  • Kahr and colleagues previously discovered that heating deltamethrin changed its crystal structure, which let it work faster
katherine-medina

Frontiers | Dietary Polyphenols and Their Role in Oxidative Stress-Induced Human Diseas... - 1 views

  • phenolic acids, flavonoids, catechins, tannins, lignans, stilbenes and anthocyanidins
  • They possess antioxidant, chemopreventive and a wide range of pharmacological properties (
  • Over 8,000 polyphenols have been reported from plants, out of several hundreds of polyphenols exist in human diets
  • ...25 more annotations...
  • Organic compounds bearing an aromatic ring with at least one hydroxyl group are termed as “phenolics”. In case, a compound possesses one or more aromatic rings having more than one hydroxyl group are called polyphenols (or polyphenolic compounds).
  • As per the C1-C6 or C3-C6 backbone, they are usually referred to as derivatives of benzoic acid or cinnamic acid
  • However, the role of the dietary polyphenols of their antioxidant abilities is still unclear.
    • katherine-medina
       
      How exactly is the role of antioxidants unclear?
  • Increased intake of foods containing polyphenols (for example, quercetin, epigallocatechin-3-gallate, resveratrol, cyanidin etc.) has been claimed to lower the incidence of a majority of chronic oxidative cellular damage, DNA damage, tissue inflammations, various cancers, viral/bacterial infections, and neurodegenerative diseases
    • katherine-medina
       
      So an increase of foods with natural extracts, so just plain vegetables that are not processed.
  • This review specifically focuses a current understanding on the dietary sources of polyphenols and their protective effects including mechanisms of action against various major human diseases.
  • γ rays
    • katherine-medina
       
      I had no idea these were a thing.
  • ROS when increased or excessively produced can cause oxidative changes/damages to all cellular macromolecules
  • Several antioxidant enzymes such as superoxide dismutase (SOD), catalase (CAT), and reduced glutathione (GSH) aid in the removal of free radicals
  • Peroxynitrite can also destroy lipoproteins and causes lipid peroxidation of cell membranes
  • ROS can also affect protein synthesis and protein functions. Protein oxidation can result in amino acid modifications
  • Flavonoids are further classified into different subgroups based on their structures such as flavan-3-ols (examples: catechin, epicatechin, epigallocatechin), isoflavones (examples: genistein, genistin, daidzenin, daidzin, biochanin A, formononetin), flavones (examples: luteolin, apigenin, chrysin), flavonones (examples: hesperetin, naringenin), flavonols (examples: quercetin, kaempferol, galangin, fisetin, myricetin), flavononol (example: taxifolin), flavylium salts (examples: cyanidin, cyanin, pelargonidin), and flavanones (examples: hesperetin, naringenin, eriodictyol, isosakuranetin)
    • katherine-medina
       
      WOW so flavonoids have a large variety and classes.
  • Polyphenols are found naturally in fruits and vegetables such as cereals, pulses, dried legumes, spinach, tomatoes, beans, nuts, peppermint, cinnamon, pears, cherries, oranges, apples, red wine, tea, cocoa, coffee and so on (Arts and Hollman, 2005; Scalbert et al., 2005). Polyphenols are classified into different groups depending on the number of aromatic (phenolic) rings they contain and the structural elements that connect these rings. They are broadly grouped into phenolic acids, flavonoids, stilbenes and lignans
    • katherine-medina
       
      SO each polyphenol has a different number of phenolic rings. What is the difference between the different polyphenols such as phenolic acid, flavonoids, stilbenes and lignans. I think that I should look at which of these groups are more effective when working with antibiotics as a way to aid them in the fight against resistant bacterias.
  • urther, OS exerts deleterious effects on DNA leading to the formation of DNA lesions, which can result in genomic instability and consequently lead to cell death.
  • In plant derived polyphenolic compounds, flavonoids comprise the largest group with an approximately 10,000 natural analogues
  • Dietary supplements containing elevated amounts of flavonoids from strawberries, lettuce, or blueberries aid in the reversal of age-related discrepancies in the brain and behavioral control in aged rats
  • Tea catechins
    • katherine-medina
       
      I ha e looked into these a bit, but I did not know that they can help with neurodegenerative diseases.
  • reduced glutathione (GSH), and on membrane sulphydryl (-SH) group in humans has been reported by Maurya and Rizvi (2009).
  • OS can be the primary or secondary reason for various CVDs. Preclinical evidence support that OS is linked to a variety of CVDs, including atherosclerosis, ischemia, stroke, cardiomyopathy, cardiac hypertrophy, and hypertension, as well as congestive heart failure
  • Dietary flavonoids may reduce endothelial disorders linked with various risk factors for atherosclerosis before plaque creation
  • The polyphenols of Hibiscus sabdariffa weaken diabetic nephropathy in terms of serum lipid profile and kidney oxidative markers
  • . Studies suggest that a diet that includes regular consumption of fruits and vegetables (rich in polyphenols such as catechins, resveratrol, ellagic acid, naringenin, quercetin etc.) significantly lowers the risk of developing many cancers.
  • Black tea polyphenols like EGCG, theaflavins and thearubigins have potent anticancer properties
  • Anti-carcinogenic effects of resveratrol are due to the antioxidant function, which inhibits hydroperoxidase, Akt (PI3K-Akt) signaling pathway, matrix metalloprotease-9, NF-kB, protein kinase C, cyclooxygenase, focal adhesion kinase and Bcl-2 (B cell lymphoma 2) biomarkers/enzymes (Athar et al., 2007)
  • Increased OS may lead to the vulnerability of the infection and also triggers the malfunctioning of cellular metabolism
  • Resveratrol shows its anti-rheumatoid arthritis properties with reduced RA patients’ swelling, tenderness, and disease activity by lowering the biochemical indicators of inflammation like MMP-3, IL-6, ESR, C-reactive protein, and undercarboxylated osteocalcin
  •  
    A good overview about polyphenols.
katherine-medina

Native language differences in the structural connectome of the human brain - ScienceDi... - 1 views

  • elations (Friederici, 2011; Wilson et al., 2011). In this network, BA44 dominates syntactic processing while the IFS supports the processing of syntactic dependency relations in sentences
  • Phonetic information is processed in auditory areas in both hemispheres, and suprasegmental information,
  • dominant stem plus affix word
  • ...10 more annotations...
  • In particular, left BA 44
  • und morphemes
  • This suggests that Arabic language processing is also driven by the core language systems built in the IFG, posterior temporal, and IPL regions. In addition, cross-linguistic electrophysiological comparisons of Arabic and Spanis
  • electrophysiological
  • 2.6. Statistics
  • and suggests that white matter plasticity in brain structure coincides with specific cognitive functions and processing demands of life-long use of a particular language. Thus, our findings contribute to our understanding of the mechanisms underlying experience-dependent white matter organization and adaptation in the human brain
  • (Malik-Moraleda et al.,
  • Native speakers of Semitic languages may rely more on regions for spatial cognition in the right hemisphere
  • .4. Di
  • Additionally, social cognitive and affective processes and other non-linguistic factors may also lead to differences in the brain. In particular, cultural values such as individualism and collectivism have been shown to influence brain function.
  •  
    How primary languages affect the brain (Arabic & German)
  •  
    You will definitely want to use more than one tag when you save. Use all keywords, and be sure to click a few of the tags from the group dictionary that come up when you click to save to the HSR2023 group.
lincolnt

Structure and function of bacteriophage T4 - PMC - 0 views

  • The 194 MDa mature head encapsidates 172 kbp dsDNA, representing 102% of the unique genome [24,25]. The head is first assembled as an empty capsid that is subsequently packaged with DNA by an ATP-dependent packaging machine. This machine binds to the same special pentameric vertex that is later occupied by the phage tail. The head is prolate, meaning that it has two icosahedral ends and a cylindrical mid-section.
katherine-medina

Peptidomimetic antibiotics disrupt the lipopolysaccharide transport bridge of drug-resi... - 0 views

  • Recently, naturally occurring peptides were proposed to interfere with the function of proteins constituting the lipopolysaccharide
  • periplasmic
    • katherine-medina
       
      The space in between the inner and outer membranes of gram-negative bacteria
  • Thanatin, a 21–amino acid defense peptide isolated from the gut of the hemipteran insect Podisus maculiventris (18), exhibits broad-spectrum antimicrobial activity
    • katherine-medina
       
      I wonder what other peptides do so as well?
  • ...7 more annotations...
  • We hypothesized that thanatin mainly acts as a competitive inhibitor of the protein-protein interactions mediating the Lpt bridge assembly
  • Thanatin, however, is not a suitable drug candidate for further development due to poor drug-like properties and rapid emergence of resistance
    • katherine-medina
       
      Why/How does thanatin have poor drug-like properties?
  • Here, we introduce thanatin-derived synthetic macrocyclic peptides found after a substantial medicinal chemistry effort.
    • katherine-medina
       
      Essentially they synthetically created it
  • β-jellyroll
    • katherine-medina
       
      structure found in proteins
  • Development of resistance against thanatin was observed after 1 day of passaging in both E. coli and K. pneumoniae and is characterized by a spontaneous FOR of 1.2 × 10−6 for E. coli at 4× MIC
    • katherine-medina
       
      That is kinda scary to think about
  • genome sequencing of a diverse panel of thanatin-resistant strains confirmed on-target modifications on LptA as the main resistance determinant in E. coli and K. pneumoniae.
  • The attractive in vitro and in vivo profile of these new antibiotics, coupled with their novel mechanism of action, showing no cross-resistance to standard of care antibiotics, may provide clinicians with additional treatment options to fight AMR, either in combination with SoC or as stand-alone antibiotics.
    • katherine-medina
       
      It is interesting to look around that these other methods that can fight off bacteria.
  •  
    An article showing a new class of antibiotics known as a peptidomimetic antibiotic.
Isabella Tungjaroenkul

The new human pangenome could help unveil the biology of everyone - 0 views

  • Being able to assess where some people have extra DNA and others are missing DNA, called structural variants, adds a more nuanced view of human genetics, O’Connor says, revealing more of its complexity (SN: 4/10/09).
  • Conversely, another study found that the very short arms of certain chromosomes, including chromosomes 13, 14 and 21, are becoming more like each other as they swap DNA.
katherine-medina

Nowcasting lightning occurrence from commonly available meteorological parameters using... - 0 views

  • They hypothesized that the mesoscale environment indirectly influences CG lightning polarity by directly controlling the storm structure, dynamics, and microphysics, which in turn control storm electrification and ground flash polarity.
  • he lightning forecast is made 30–45 min before rainfall occurs
    • katherine-medina
       
      I guess that would make sense considering the fact that the electricity in the air before a storm is active.
  •  
    An article about how AI can now predict where lightning will occur
katherine-medina

Increased 3-O-sulfated heparan sulfate in Alzheimer's disease brain is associated with ... - 1 views

  • Genetic factors contribute substantially to the pathological process of AD as demonstrated by the fact that the genetic heritability in AD is in the range of between 60 and 80% (10).
  • however, whether the variants alter the level of 3-OST-1 enzyme activity to change the structure of HS remains unknown
    • katherine-medina
       
      Good to note what exactly the article remains unsure about
  • The synthesis of additional 13C-labeled calibrants to cover these three reported 3-O-sulfated tetrasaccharides will be the subject for future study.
    • katherine-medina
       
      LOOK INTO THIS PART CAYSE THEY ARE SAYING THAT THEY ARE NOT FULLY SURE
  • ...4 more annotations...
  • the elevation of total HS and the percentage of the 3-O-sulfated domain in HS.
  • HS and tau revealed that the sugar mainly interacts with the proline-rich region 2, a repeat domain 2 in tau protein
  • Further analysis of the distribution of 3-O-sulfated HS from different areas of AD brains will be of interest and the subject for a subsequent study.
  • Experimental design
    • katherine-medina
       
      READ THIS IF THIS TOPIC COMES BACK UP AGAIN
  •  
    A interesting study about a sulfate that suggests that Alzheimer's is genetic
katherine-medina

Marine Drugs | Free Full-Text | Microalgae Photo-Protectants and Related Bio-Carriers L... - 0 views

shared by katherine-medina on 14 Sep 23 - No Cached
Sean Nash liked it
  • This review focuses on the use of these microalgae compounds obtained by UV stimulation and takes advantage of their natural UV-resistant characteristics to potentially apply them as an alternative for UV protection products.
    • katherine-medina
       
      Can I put this on a plant in order to mitigate heat damage?
  • pproximately 90–99% of the solar UV radiation energy that reaches the Earth’s surface is UV-A
  • whereas only 1–10% is UV-B [4]. Both UV-A and UV-B are responsible for one of the biggest concerns related to UV radiation, which is skin cancer
  • ...28 more annotations...
  • The mechanisms leading to skin damage are not fully understood and may derive from the generation of ROS and subsequent lipid peroxidation
  • To prevent photodamage, organisms have evolved to provide biochemical and physical defenses to UV by synthesizing robust bioactive compounds
  • Some algae species synthesize substances with chemical structures that can absorb UV radiation as well as inhibit actions on melanin synthesis
    • katherine-medina
       
      Which algaes
  • Microalgae can produce organic metabolites, such as sporopollenin, scytonemin, and MAAs to mention a few, and these metabolites have the purpose to protect the microalgae from UV radiation while allowing visible radiation involved in photosynthesis to pass through
  • two marine microalgae Pavlova lutheri, currently known as Diacronema lutheri, and Odontella aurita
    • katherine-medina
       
      After I get through the other ones I will get to you my pretty
  • UV-Resistant Microalgae
  • Marine organisms, including eukaryotic microalgae and cyanobacteria, during evolution, have developed physiological and biochemical traits for defense and/or tolerance to UV rays
    • katherine-medina
       
      Come back to this part
  • This research also mentioned the Antarctic microalgae Chaetoceros dichaeta, Phaeocystis antarctica, and Polarella glacialis, these were subjected to acclimation to photosynthetically active radiation (PAR) and showed resistance to UV-B rays.
  • It was found that the tolerant species contained substantial amounts of acetolysis-resistant residue
  • So far, several species, e.g., Coelastrella rubescens, Coelastrella terestris, Enallax coelastroides, Scotiella chlorelloidea, Ankistrodesmus spiralis, Chlorella minutissima, Chlorella sorokiniana, and Pseudococcomyxa sp. have been reported as rich sources of MAAs
  • They are abundant in various aquatic and terrestrial environments and are known for being eco-sustainable compounds since they are the outcome of the evolution of algae. Unlike their synthetic counterparts used unconventional sunscreens, there are no possibilities for pollution caused by them [22]. Thus, algal metabolites shape the safety and sustainability profiles of commercial sunscreens [22].
    • katherine-medina
       
      How long can the algae last on the skin or leaf of a plant
  • The results obtained point out different resistance and defense mechanisms of the four microalgae in response to UV-B irradiance and suggest that the strain of Nostoc sp. tested is the most suitable for surviving under the high UV irradiation [33]
  • Certain microalgae produce organic metabolites, such as sporopollenin, scytonemin, and MAAs as well as other UV-absorbing substances to counteract the harmful effects of UV radiation and protect themselves while allowing visible radiation involved in photosynthesis to pass through
  • The best known photoprotective response in marine organisms is the production or accumulation of UV-absorbing compounds, including MAAs as the most common compounds with such properties, but there are also others, such as scytonemin, carotenoids, alganean, and various secondary metabolites
    • katherine-medina
       
      photoprootective means protecting the skin
  • f low molecular weight, commonly found in marine environments. These compounds have absorption maxima in the UV region between 310 and 360 nm, they can dissipate radiation as heat without producing ROS. Under fixed light, MAA biosynthesis seems the most effective photoprotective mechanism
  • For these reasons, they potentially can prevent UV-induced skin damage
  • It was reported that species of microalgae that were highly tolerant to UV radiation had substantial amounts of sporopollenin. This compound functions as an antimicrobial agent, confers rigidness to the cell wall, and may further protect from UV rays by increasing the optical density, whereas species containing little or no sporopollenin were highly UV radiation susceptible
  • However, the potential of microalgae as topical photoprotectants has not been fully exploited, since there are not a lot of studies regarding this application.
  • Other reports determine that scytonemin is suspected to be synthesized from metabolites of aromatic amino acid biosynthesis
    • katherine-medina
       
      No set decision on how it is created
  • Alginate is a
  • ydration
  • However, some microalgae have a great ability to overcome or counteract different stresses such as intense solar UV radiation, this has been happening over the years and with the evolution of microalgae, some examples of defense and/or tolerance mechanisms are: DNA repair, synthesis of antioxidants, and enzymatic/non-enzymatic compounds, such as MAAs and scytonemin to counteract the harmful effects of UV radiation
  • Scytonemin is a yellow-brown lipid soluble sheath pigment that absorbs maximally in the UV-A and UV-C regions, but with some absorbance in the UV-B region. It has an in vivo absorption maximum of 370 nm.
  • tigate UV damage induced.
  • photosensitizers, their antioxidant
  • V
  • ed.
  • t
  •  
    A recent article showing the potential use of microalgae as a sunscreen.
  •  
    Yes..... let's chat this one out!
1 - 10 of 10
Showing 20 items per page