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The Indo-West Pacific is the largest, most biodiverse marine ecosystem on Earth, and many of the species it supports have comparably wide ranges. Writing in "The Origin of Species," Charles DARWIN noted that "… many fish range from the Pacific into the Indian Ocean, and many shells are common to the eastern islands of the Pacific and the eastern shores of Africa, on almost exactly opposite meridians of latitude."

COrona VIrus Disease (COVID) 2019 pandemic forced most countries to go into complete lockdown and India went on complete lockdown from 24th March 2020 to 8th June 2020. To understand the possible implications of lockdown, we analyze the long-term distribution of Net Primary Productivity (NPP) in the North Indian Ocean (NIO) and the factors that influence NPP directly and indirectly, for the period 2003-2019 and 2020 separately. There exists a seasonal cycle in the relationship between Aerosol Optical Depth (AOD), Chlorophyll-a (Chl-a) and NPP in agreement with the seasonal transport of aerosols and dust into these oceanic regions. In Arabian Sea (AS), the highest Chl-a (0.58 mg/m3), NPP (696.57 mg/C/m2/day) and AOD (0.39) are observed in June, July, August, and September (JJAS). Similarly, maximum Chl-a (0.48 mg/m3) and NPP (486.39 mg/C/m2/day) are found in JJAS and AOD (0.27) in March, April, and May (MAM) in Bay of Bengal. The interannual variability of Chl-a and NPP with wind speed and Sea Surface Temperature (SST) is also examined, where the former has a positive and the latter has a negative feedback to NPP. The interannual variability of NPP reveals a decreasing trend in NPP, which is interlinked with the increasing trend in SST and AOD. The analysis of wind, SST, Chl-a, and AOD for the pre-lockdown, lockdown, and post lockdown periods of 2020 is employed to understand the impact of COVID-19 lockdown on NPP. The assessment shows the reduction in AOD, decreased wind speeds, increased SST and reduced NPP during the lockdown period as compared to the pre-lockdown, post-lockdown and climatology. This analysis is expected to help to understand the impact of aerosols on the ocean biogeochemistry, nutrient cycles in the ocean biogeochemical models, and to study the effects of climate change on ocean ecosystems.

The oxygen minimum zone has a significant effect on primary production, marine biodiversity, food web structure, and marine biogeochemical cycle. The Arabian Sea oxygen minimum zone (ASOMZ) is one of the largest and most extreme oxygen minimum zones in the world, with a positional decoupling from the region of phytoplankton blooms. The core of the ASOMZ is located to the east of the high primary production region in the western Arabian Sea. In this study, a coupled physical-biogeochemical numerical model was used to quantify the impact of ocean circulation and settling of particulate organic matters (POMs) on the decoupling of the ASOMZ. Model results demonstrate that the increased (decreased) dissolved oxygen replenishment in the western (central) Arabian Sea is responsible for decoupling. The oxygen-rich intermediate water (200-1,000 m) from the southern Arabian Sea enters the Arabian Sea along the west coast and hardly reaches the central Arabian Sea, resulting in a significant oxygen replenishment in the western Arabian Sea high-productivity region (Gulf of Aden) but only a minor contribution in the central Arabian Sea. Besides that, the POMs that are remineralized to consume central Arabian Sea dissolved oxygen comprises not only local productivity in winter bloom but also the transport from the western Arabian Sea high-productivity region (Oman coast) in summer bloom. More dissolved oxygen replenishment in the western Arabian Sea, and higher dissolved oxygen consumption and fewer dissolved oxygen replenishment in the central Arabian Sea could contribute to the decoupling of the ASOMZ and phytoplankton productive zone.

Marine soft-sediments sustain functionally important benthic assemblages that are critical for remineralization of organic matter and supply of nutrients to the water column. While these assemblages are well studied along continental margins, investigations from insular margin that surround oceanic islands are very limited. This paper examines the distribution and standing stock of macrozoobenthos at 50, 100, and 200 m depth contours surrounding the Andaman and Nicobar archipelago in the tropical Indian Ocean. The standing stock of macrozoobenthos decreased from the mesophotic reef areas (50 m depth) to the deeper strata (200 m), particularly in the case of the dominant groups, the polychaetes and crustaceans. Smaller-sized, interstitial polychaetes and crustaceans were abundant in the coarser sandy sediments at the shallower sites. The polychaetes were represented by 606 species (279 genera) in the study, of which >50% were rare species. Based on polychaete species composition, three regions were delineated in the study area - the Nicobar margin, the western margin of the Andaman (Bay of Bengal sector), and the eastern margin of the Andaman (Andaman Sea sector). The long, uninterrupted Andaman Island chain formed a geographic barrier separating the eastern and western margins, resulting in the regional distinctions in sediment nature and hydrographic characteristics, which in turn influenced species distribution. Corresponding differences were absent in the case of the Nicobar Islands, which are widely separated by transecting channels, permitting exchange of water between the Bay of Bengal and the Andaman Sea. Within the three regions, polychaete communities changed significantly in taxonomic and functional composition with increasing depth. The well oxygenated, coarse sandy sediments around mesophotic reefs (50 m) harbored predator-dominated assemblages. The 200 m sites, which were characterized by oxygen minimum conditions (<0.5 ml.l-1), particularly around th

Adult male sperm whales (Physeter macrocephalus) are long distance runners of the marine realm, feeding in high latitudes and mating in tropical and subtropical waters where stable social groups of females and immatures live. Several areas of uncertainty still limit our understanding of their social and breeding behavior, in particular concerning the potential existence of geographical and/or social fidelities. In this study, using underwater observation and sloughed-skin sampling, we looked for male social fidelity to a specific matrilineal sperm whale group near Mauritius. In addition, we captured a wider picture of kin relationships and genetic diversity of male sperm whales in the Indian Ocean thanks to biopsies of eight individuals taken in a feeding ground near the Kerguelen and Crozet Archipelagos (Southern Indian Ocean). Twenty-six adult male sperm whales were identified when socializing with adult females and immatures off Mauritius. Sloughed-skin samples were taken from thirteen of them for genetic analysis. Long-term underwater observation recorded several noteworthy social interactions between adult males and adult females and/or immatures. We identified seven possible male recaptures over different years (three by direct observation, and four at the gametic level), which supports a certain level of male social fidelity. Two probable first- and thirty second-degree kin relationships were highlighted between members of the social unit and adult males, confirming that some of the adult males observed in Mauritian waters are reproductive. Male social philopatry to their natal group can be excluded, as none of the males sampled shared the haplotype characteristic of the matrilineal social group. Mitochondrial DNA control region haplotype and nucleotide diversities calculated over the 21 total male sperm whales sampled were similar to values found by others in the Indian Ocean. Our study strongly supports the existence of some levels of male sperm whale socia

The Introduction of this paper argues that current coastal and ocean management approaches like marine spatial planning (MSP) often do not adequately acknowledge and integrate Indigenous and Local Knowledge (ILK). This is problematic because how humans value and perceive coastal and marine resources is integrally linked to how they use and manage these resources, especially in adapting to social-ecological change. Coastal and marine resources are situated within complex social-ecological systems that are culturally, economically, historically and politically embedded. Therefore, management approaches have to integrate transdisciplinary and contextual perspectives in order to be relevant, sustainable and adaptive. Following extensive research in Algoa Bay, South Africa this article highlights several pathways to bridge the gap between existing ILK and current coastal and ocean management approaches. The Methods section discusses how the authors worked in tandem with a bottom-up (engaging with Indigenous and local coastal and marine resource users) and top-down (engaging with coastal governance authorities and practitioners) approach. In order to answer the primary research question "How can ILK be integrated into area-based ocean management like MSP"? the authors employed arts-based participatory methods as well as in-depth interviews and workshops with coastal governance authorities and practitioners over several months. This work then culminated in a one-day multi-stakeholder workshop which brought both ILK holders and coastal authorities and practitioners together to collaboratively identify pathways to integrate this knowledge into coastal and ocean management. In the Results and Discussion section the authors present and discuss five co-identified pathways to integrate ILK in coastal and ocean management which include: adopting contextual approaches to coastal and ocean management; increasing transparency and two-way communication between coastal authorities and

Stable isotope analysis of dermis was used to examine foraging behavior of whale sharks at Ningaloo Reef in Western Australia. Values of δ13C and δ15N in dermis were compared to those obtained from likely species of local prey. The δ13C values of zooplankton and nektonic taxa at Ningaloo ranged from −18.9‰ to −16.5‰ reflecting the different carbon sources (from pelagic to more inshore and benthic) entering the food web. Isotopic values also varied depending on the diet-to-tissue discrimination factor applied in the analysis. When data was corrected using factors derived from slow turnover, structural cartilage in fins, whale sharks showed a greater reliance on pelagic food webs, whereas analyses using raw data suggested a greater dietary component from benthic and inshore habitats. Variability in δ15N values (6.9‰ to 10.8‰) implied different patterns of foraging among whale sharks, likely indicating movement among foraging localities that occur at Ningaloo Reef and along the Western Australian coast. There was evidence of enrichment in 15N occurring with increasing size in males and females, a pattern that could have been due to changes in growth rate and trophic level with age and/or an ontogenetic shift in feeding grounds. Given the variability potentially induced in stable isotope values by differences in rates of turnover of tissues and the use of diet-to-tissue discrimination factors, future studies would benefit from a multi-technique approach using different tissues to identify the diet of whale sharks.

The Indian Ocean humpback dolphin (Sousa plumbea) is "endangered" with likely less than 500 animals remaining in South African waters. Established in 2016, the SouSA Consortium is a formalised network of scientists and conservationists to combine knowledge and research efforts, and make coordinated decisions with the aim of conserving the species. The first collaborative project collated available photo-identification data in an attempt to refine a national population estimate and investigate movements between research sites. This work was able to identify 250 uniquely marked individuals, with the population divided into the south-coast (Agulhas bioregion) and east-coast (Natal bioregion) populations. Environmental factors almost certainly play a role in the declining numbers of the species in South African waters. However, individual threats and solutions are challenging to identify as the South African marine environment is undergoing significant natural and anthropogenic changes with major shifts in the distribution and numbers of some prey, competitor and predator species. Therefore, we believe that a continued investigation of potential contributing factors and their interaction will take too long, inevitably resulting in another case of documenting extinction. With this in mind, we present the results of a SWOT (Strengths, Weaknesses, Opportunities, and Threats) analysis in an effort to help us identify the next steps to take toward the conservation of humpback dolphins in South African waters. We unanimously conclude that no single cause for the rapid decline of humpback dolphins in South African waters can be identified, and that the cumulative effects of multiple stressors, which are difficult to pinpoint and mitigate, are impacting population numbers. While highlighting the need for continued research, we suggest a shift toward more action-focused conservation efforts, the first concrete steps being the development of a Conservation Management Plan wit

Declines in abundance of sea snakes have been observed on reefs throughout the Indo-Pacific, although the reasons are unknown. To date, surveys have occurred on shallow reefs, despite sea snakes occurring over a large depth range. It is not known if populations of sea snakes in deep habitats have undergone similar declines. To address this, we analysed deep-water video data from a historical hotspot of sea snake diversity, Ashmore Reef, in 2004, 2016, and 2021. We collected 288 hours of video using baited remote underwater videos and a remotely operated vehicle at depths between 13 and 112 m. We observed 80 individuals of seven species with Aipysurus laevis (n = 30), Hydrophis peronii (n = 8), and H. ocellatus (n = 6) being the most abundant. Five of the species (A. duboisii, A. apraefrontalis, H. ocellatus, H. kingii, and Emydocephalus orarius) had not been reported in shallow waters for a decade prior to our study. We found no evidence of a decline in sea snakes across years in deep-water surveys, although abundances were lower than those in early shallow-water surveys. A comparison of BRUVS data from 2004 and 2016 was consistent with the hypothesis that predation by sharks may have contributed to the loss of sea snakes in shallow habitats. Our study highlights the use of underwater video to collect information on sea snakes in the mesophotic zone and also suggests that future monitoring should include these depths in order to capture a more complete representation of habitats occupied.

Anthropogenic climate change has caused widespread loss of species biodiversity and ecosystem productivity across the globe, particularly on tropical coral reefs. Predicting the future vulnerability of reef-building corals, the foundation species of coral reef ecosystems, is crucial for cost-effective conservation planning in the Anthropocene. In this study, we combine regional population genetic connectivity and seascape analyses to explore patterns of genetic offset (the mismatch of gene-environmental associations under future climate conditions) in Acropora digitifera across 12 degrees of latitude in Western Australia. Our data revealed a pattern of restricted gene flow and limited genetic connectivity among geographically distant reef systems. Environmental association analyses identified a suite of loci strongly associated with the regional temperature variation. These loci helped forecast future genetic offset in gradient forest and generalized dissimilarity models. These analyses predicted pronounced differences in the response of different reef systems in Western Australia to rising temperatures. Under the most optimistic future warming scenario (RCP 2.6), we predicted a general pattern of increasing genetic offset with latitude. Under the extreme climate scenario (RCP 8.5 in 2090-2100), coral populations at the Ningaloo World Heritage Area were predicted to experience a higher mismatch between current allele frequencies and those required to cope with local environmental change, compared to populations in the inshore Kimberley region. The study suggests complex and spatially heterogeneous patterns of climate-change vulnerability in coral populations across Western Australia, reinforcing the notion that regionally tailored conservation efforts will be most effective at managing coral reef resilience into the future.

The generation and propagation of internal tides in the Andaman Sea are investigated using a three-dimensional high-resolution numerical model. Three categories of experiments, including driving the model with four main semidiurnal tides (M2, S2, N2, and K2), four main diurnal tides (K1, O1, P1, and Q1), and eight main tides (M2, S2, N2, K2, K1, O1, P1, and Q1), are designed to examine the effects of barotropic tides. The results show that the semidiurnal internal tides are dominant in the Andaman Sea, and the inclusion of diurnal barotropic tides negligibly modulates this result. That is partly due to the strength of the diurnal barotropic tides is generally one order smaller than that of the semidiurnal barotropic tides in this region. The sensitivity experiments put this on a firmer footing. In terms of the internal tidal energy, the experiments driven by the diurnal barotropic tides are three orders and one order smaller than those driven by the semidiurnal barotropic tides, respectively, during the spring and neap tides. In addition, the experiments result in total barotropic-to-baroclinic energy conversion rates over the Andaman Sea 29.15 GW (driven by the eight tides), 29.24 GW (driven by the four semidiurnal tides), and 0.05 GW (driven by the fourdiurnal tides) in the spring tidal period and 3.08 GW, 2.56 GW, and 0.31 GW in the neap tidal period, respectively. Four potential generation regions of internal tides are found, three of which are in the Andaman and Nicobar Islands and one in the northeastern Andaman Sea.

The Seychelles-Chagos Thermocline Ridge (SCTR, 5°S-10°S, 50°E-80°E) is a unique open-ocean upwelling region in the southwestern Indian Ocean. Due to the negative wind stress curl between the equatorial westerlies and southeasterly trade winds, SCTR is known as a strong upwelling region with high biological productivity, providing a primary fishing zone for the surrounding countries. Given its importance in shaping the variability of the Indian Ocean climate by understanding the sea-air interaction and its dynamics, the simulation of SCTR is evaluated using outputs from the Coupled Model Intercomparison Project Phase Sixth (CMIP6). Compared to observations, 23 out of 27 CMIP6 models tend to simulate considerably deeper SCTR thermocline depth (defined as the 20°C isotherm depth (D20))- a common bias in climate models. The deep bias is related to the easterly wind bias in the equatorial to southern Indian Ocean, which is prominent in boreal summer and fall. This easterly wind bias produces a weak annual mean Ekman pumping, especially in the boreal fall. Throughout the year, the observed Ekman pumping is positive and is driven by two components: the curl term, is associated with the wind stress curl, leads to upwelling during boreal summer to fall; the beta term, is linked to planetary beta and zonal wind stress, contributes to downwelling during boreal spring to fall. However, the easterly wind bias in the CMIP6 increases both the positive curl and negative beta terms. The beta term bias offsets the curl term bias and reduces the upwelling velocity. Furthermore, the easterly wind bias is likely caused by the reduced east-west sea surface temperature (SST) difference associated with a pronounced warm bias in the western equatorial Indian Ocean, accompanied by the east-west mean sea level pressure gradient over the Indian Ocean. Furthermore, this study finds local wind-induced Ekman pumping to be a more dominant factor in thermocline depth bias than Rossby waves,

Ocean acidification, deoxygenation, and warming are three interconnected global change challenges caused by increased anthropogenic carbon emissions. These issues present substantial threats to marine organisms, ecosystems, and the survival of coastal communities depending on these ecosystems. Coastal upwelling areas may experience significant declines in pH, dissolved oxygen (DO), and temperature levels during upwelling events, making marine organisms and ecosystems in these areas more susceptible to ocean acidification and deoxygenation. Understanding the dynamics of pH, DO, and temperature in coastal upwelling areas is essential for evaluating the susceptibility of resident organisms and ecosystems to lower pH and DO conditions occurring during upwelling events. To accomplish this, we used the pH and the DO loggers to measure high-frequency data for pH and DO, respectively, over six months in the open ocean and for a 24-hour cycle within the mangrove, seagrass, and coral reef ecosystems of the Tanga-Pemba Seascape (T-PS) during the northeast monsoon season. Our findings revealed the occurrence of multiple upwelling events, with varying durations, that result in significant declines in pH, DO, and temperature within the seascape. This is the first study to confirm the occurrence of multiple upwelling events in the T-PS. Moreover, the study has revealed a pH threshold value of 7.43 for ocean acidification in the T-PS. This is the first study to report a threshold value for ocean acidification in coastal upwelling areas of the Western Indian Ocean (WIO). Furthermore, it revealed that the extremely low levels of pH that occurred during upwelling events were above the pH threshold value of 7.43 for ocean acidification, while the extremely low levels of DO fell below the oxygen threshold value of 4.6 mg/L for deoxygenation. During upwelling events, seagrass and coral reef ecosystems, but not mangrove ecosystems, demonstrated elevated mean hourly values of pH and DO com

Quantitatively assessing the porewater dissolved inorganic carbon (DIC) cycling in methane-enriched marine sediments is crucial to understanding the contributions of different carbon sources to the global marine carbon pool. In this study, Makran accretionary wedge was divided into Zone 1 (high methane flux area) and Zone 2 (background area). Porewater geochemical compositions (Cl-, SO42-, NH4+, Mg2+, Ca2+, Ba2+, DIC and δ13C-DIC) and a reaction-transport model were used to determine the DIC source and calculate the DIC flux through carbonate precipitation and releasing into overlying seawater in sediments. Zone 1 is characterized by the shallower depth of sulfate-methane transition (SMT), where most of porewater sulfate was consumed by anaerobic oxidation of methane (AOM). In contrast, a relatively low flux of methane diffusion in Zone 2 results in a deeper SMT depth and shallow sulfate is predominantly consumed by organoclastic sulfate reduction (OSR). Based on the porewater geochemical profiles and δ13C mass balance, the proportions of porewater DIC originating from methane were calculated as 51% in Zone 1 and nearly 0% in Zone 2. An increase of porewater DIC concentration leads to authigenic carbonate precipitation. Solid total inorganic carbon (TIC), X-ray diffractometry (XRD) and scanning electron microscopy (SEM) analysis display that carbonate content increases with depth and aragonite appears at or below the depths of SMT. Meanwhile, the flux of DIC released from sediments calculated by the reaction-transport model is 51.3 ~ 90.4 mmol/m2·yr in Zone 1, which is significantly higher than that in Zone 2 (22.4 mmol/m2·yr). This study demonstrates that AOM serves as the dominant biogeochemical process regulating the porewater DIC cycle, which has an important impact on the authigenic carbonate burial and the seawater carbonate chemistry.

Small-scale fisheries (SSF) are highly susceptible to changes in weather patterns. For example, in Nosy Barren, Madagascar, SSF use traditional pirogues with handcrafted sails that rely on seasonal wind and sea conditions. As climate change is expected to increase the intensity and frequency of severe weather, it is important to understand how changes in weather affect SSF fishing efforts. Yet, a gap exists in the understanding of how changes in meteorological conditions affect small scale fishers. This study combines fishers' meteorological knowledge of weather conditions that allow for small-scale fishing with long-term remotely sensed meteorological data to quantify how fishing effort, defined as available fishing hours, of SSF in coastal Madagascar has changed between 1979-2020 in response to long-term weather trends. Results show a significant decrease in available fishing hours over the examined time period. Particularly, we found that a decrease in available fishing hours between 1979-2020 with a loss of 21.7 available fishing hours per year. Increased adverse weather conditions, likely associated with climate change, could decrease fishers access to crucial resources needed for the food and livelihood security. Climate change adaptation strategies will need to account for changing weather impacts on fishing availability.

The scaly-foot snail (Chrysomallon squamiferum) inhabiting deep-sea hydrothermal vents in the Indian Ocean relies on its sulphur-oxidising gammaproteobacterial endosymbionts for nutrition and energy. In this study, we investigate the specificity, transmission mode, and stability of multiple scaly-foot snail populations dwelling in five vent fields with considerably disparate geological, physical and chemical environmental conditions. Results of population genomics analyses reveal an incongruent phylogeny between the endosymbiont and mitochondrial genomes of the scaly-foot snails in the five vent fields sampled, indicating that the hosts obtain endosymbionts via horizontal transmission in each generation. However, the genetic homogeneity of many symbiont populations implies that vertical transmission cannot be ruled out either. Fluorescence in situ hybridisation of ovarian tissue yields symbiont signals around the oocytes, suggesting that vertical transmission co-occurs with horizontal transmission. Results of in situ environmental measurements and gene expression analyses from in situ fixed samples show that the snail host buffers the differences in environmental conditions to provide the endosymbionts with a stable intracellular micro-environment, where the symbionts serve key metabolic functions and benefit from the host's cushion. The mixed transmission mode, symbiont specificity at the species level, and stable intracellular environment provided by the host support the evolutionary, ecological, and physiological success of scaly-foot snail holobionts in different vents with unique environmental parameters.