Group items tagged

The aim of this study was to document the composition and distribution of deep-water fishes associated with a submarine canyon-valley feature. A work-class Remotely Operated Vehicle (ROV) fitted with stereo-video cameras was used to record fish abundance and assemblage composition along transects at water depths between 300 and 900 metres. Three areas (A, B, C) were sampled along a submarine canyon-valley feature on the continental slope of tropical north-western Australia. Water conductivity/salinity, temperature, and depth were also collected using an ROV mounted Conductivity Temperature and Depth (CTD) instrument. Multivariate analyses were used to investigate fish assemblage composition, and species distribution models were fitted using boosted regression trees. These models were used to generate predictive maps of the occurrence of four abundant taxa over the survey areas. CTD data identified three water masses, tropical surface water, South Indian Central Water (centred ∼200 m depth), and a lower salinity Antarctic Intermediate Water (AAIW) ∼550 m depth. Distinct fish assemblages were found among areas and between canyon-valley and non-canyon habitats. The canyon-valley habitats supported more fish and taxa than non-canyon habitats. The fish assemblages of the deeper location (∼700-900 m, Area A) were different to that of the shallower locations (∼400-700 m, Areas B and C). Deep-water habitats were characterised by a Paraliparis (snail fish) species, while shallower habitats were characterised by the family Macrouridae (rat tails). Species distribution models highlighted the fine-scale environmental niche associations of the four most abundant taxa. The survey area had a high diversity of fish taxa and was dominated by the family Macrouridae. The deepest habitat had a different fish fauna to the shallower areas. This faunal break can be attributed to the influence of AAIW. ROVs provide a platform on which multiple instruments can be mounted and com

Highly mobile marine megafauna species, while widely distributed and frequently threatened, often aggregate in distinct localized habitats. Implementation of local management initiatives within these hotspots is more achievable than developing effective conservation strategies that encompass their entire distributions. Such measures have the potential for disproportionate population-level benefits but rely on a detailed understanding of spatiotemporal habitat use. To that end, we examined the residency and small-scale habitat use of 51 whale sharks (Rhincodon typus) over 5 years at an aggregation site in Tanzania using passive acoustic telemetry. Whale sharks were highly resident within and across years, with a combined maximum residency index of 0.39. Although fewer sharks were detected from March to September, residency was high throughout the year. Ancillary photographic-identification data showed that individual residency persisted before and after tag attachment. Kernel utilization distributions (KUD) and movement networks both revealed the same spatiotemporal pattern of habitat use, with a small core habitat (50% KUD area for all sharks combined = 12.99 km2) that predictably changed on a seasonal basis. Activity spaces did not differ with time of day, sex, or size of the sharks, indicating a population-level pattern driven by prey availability. The small and predictable core habitat area at this site means that site-based management options to reduce shark injuries and mortality from boat strike and fishing gear entanglement can be spatially targeted for maximum effectiveness and compliance by human users.

Coral reefs are biodiversity hotspots, places of high endemicity and provide essential services to billions of people globally. With increasing threats to these reefs worldwide, there is a need to implement faster, more efficient ways to monitor spatial and temporal patterns of biodiversity. Environmental DNA (eDNA) metabarcoding offers a promising tool to address this issue, as it has revolutionized our ability to monitor biodiversity from complex environmental samples such as seawater. However, the capacity for eDNA to resolve fine scale shifts in community composition across habitats in seascapes is yet to be fully explored. Here, we applied eDNA metabarcoding using the rRNA 18S Universal eukaryote assay to explore differences in community profiles between samples collected from the lagoon and reef slope habitats across more than 170 km of the Ningaloo Coast World Heritage Area in Western Australia. We recovered 2061 amplicon sequence variants that comprised of 401 taxa spanning 14 different metazoan phyla such as cnidarians, poriferans, molluscs, algae, worms, and echinoderms. Our results revealed strong clustering of samples by habitat type across the length of the reef. Community dissimilarity (beta diversity) between samples collected from the reef slope and lagoon habitats was high and was driven largely by a strong rate of spatial turnover, indicating a distinct set of taxa representing each reef zone community. We also detected a strong pattern of isolation by distance within our slope samples, suggesting that communities are spatially stratified across the length of the reef. Despite high connectivity due to regular flushing of the lagoon environment, our results demonstrate that metabarcoding of seawater eDNA from different habitats can resolve fine scale community structure. By generating multi-trophic biodiversity data, our study also provided baseline data for Ningaloo from which future changes can be assessed.

The Java Trench is the only subduction trench in the Indian Ocean that extends to the hadal zone (> 6,000 m water depth), and except for sevenbenthic trawls acquired around the 1950s, there has been little to no sampling at hadal depths undertaken since. In 2019, we undertook a 5-day expedition comprising a scientific dive using a full ocean depth-rated submersible, the DSV Limiting Factor, seven hadal-lander deployments, and high-resolution bathymetric survey. The submersible performed a video transect from the deepest point of the trench, up a 150 m high near-vertical escarpment located on the forearc, and then across a plateau at a depth of ∼7,050 m to make in situ observations of the habitat heterogeneity and biodiversity inhabiting these hadal depths. We found the Java Trench hadal community to be diverse and represented by 10 phyla, 21 classes, 34 orders and 55 families, with many new records and extensions in either depth or geographic range, including a rare encounter of a hadal ascidian. The submersible transect revealed six habitats spanning the terrain. The deepest trench axis comprised fine-grained sediments dominated by holothurians, whereas evidence of active rock slope failure and associated talus deposits were prevalent in near-vertical and vertical sections of the escarpment. Sediment pockets and sediment pouring down the steep wall in "chutes" were commonly observed. The slope terrain was dominated by two species in the order Actiniaria and an asteroid, as well as 36 instances of orange, yellow, and white bacterial mats, likely exploiting discontinuities in the exposed bedrock, that may indicate a prevalence of chemosynthetic input into this hadal ecosystem. Near the top of the escarpment was an overhang populated by > 100 hexactinellid (glass) sponges. The substrate of the plateau returned to fine-grained sediment, but with a decreased density and diversity of epifauna relative to the trench floor. By providing the first visual insights of the h

In recent years, attaining gonadal maturation in smaller Hilsa (Tenualosa ilisha) has become a burning issue for Hilsa fishery of Bangladesh. Causes of early maturation are not yet clearly understood. Along with environmental parameters, genetic differentiation within the population was hypothesized as the main driver, and therefore, assessing the correlation between gonadosomatic index (GSI) and environmental factors and analyzing genetic diversity were set as objectives of the present study. To address these complex issues, six diverse habitats across Bangladesh were chosen for Hilsa sample collection. For GSI, gonad was dissected from fresh fish and preserved in Bouin's fluid for histological observation. Water quality parameters such as temperature, dissolved oxygen, pH, and salinity were also assessed. 35 fish from each habitat were used to extract and amplify DNA through the PCR technique, and genetic diversity was examined. Further, to draw a firm conclusion, the phylogenetic tree of the Hilsa population was developed by the unweighted pair-group method of arithmetic mean method based on the Cyt b gene of mitochondrial DNA. Results of GSI studies revealed that peak spawning months of T. ilisha were in October and February, where October showed the highest values in all six habitats. Histological examination showed different stages of gonadal development in different sizes and ages of Hilsa. Among all sampling sites, no statistical difference was observed for GSI value; however, smaller sized and aged Hilsa being ripped were evident in Gaglajur Haor and Kali River. Among the observed water quality parameters, temperature correlated with GSI strongly. Increased GSI was observed with temperature augmentation from downstream to upper stream, irrespective of body size and age. A perplex correlation between dissolved oxygen of observed habitats and GSI was executed. Other physico-chemical parameters viz. pH and salinity exhibited weak and moderate positive associ

Repeat multibeam mapping of two slope-confined canyons on the northwest Australian margin provides new understanding of the processes that are active in shaping these environments. The Cape Range and Cloates canyons initiate on the mid to lower continental slope but are now known to be connected to the shelf via small channels and gullies. Both canyons have areas of steep walls, with evidence of slides, and large depressions on the canyon floors. These canyons were first mapped systematically with multibeam sonar in 2008 and were remapped in 2020 during a biodiversity survey that also collected high-resolution imagery and biological samples. Comparison of seabed features between these two time periods indicates active sliding, minor headwall retreat and continued excavation of deep depressions on the canyon floor. Significantly, intact blades of displaced seagrass imaged at various depths up to 4200 m throughout both canyons indicates that material sourced from the adjacent continental shelf is being transported through these canyon systems. Turbidity currents are actively modifying canyon walls and floor depressions, while also providing a sediment source that has resulted in minor accretion on the canyon floor. Sedimentation likely regulates benthic communities in these canyons, with imagery showing highest densities of sessile invertebrates in habitats protected from sedimentation (e.g. rock overhangs, cliff edges). Since steep canyon habitats are rare within these canyons, and support high benthic abundance, they likely represent biologically significant areas of the Gascoyne Marine Park. Repeat mapping provides an understanding of the dynamics of these canyons and a context for assessing and monitoring the stability of the seabed habitats within this marine reserve.

Imagery has become a key tool for assessing deep-sea megafaunal biodiversity, historically based on physical sampling using fishing gears. Image datasets provide quantitative and repeatable estimates, small-scale spatial patterns and habitat descriptions. However, taxon identification from images is challenging and often relies on morphotypes without considering a taxonomic framework. Taxon identification is particularly challenging in regions where the fauna is poorly known and/or highly diverse. Furthermore, the efficiency of imagery and physical sampling may vary among habitat types. Here, we compared biodiversity metrics (alpha and gamma diversity, composition) based on physical sampling (dredging and trawling) and towed-camera still images (1) along the upper continental slope of Papua New Guinea (sedimented slope with wood-falls, a canyon and cold seeps), and (2) on the outer slopes of the volcanic islands of Mayotte, dominated by hard bottoms. The comparison was done on selected taxa (Pisces, Crustacea, Echinoidea, and Asteroidea), which are good candidates for identification from images. Taxonomic identification ranks obtained for the images varied among these taxa (e.g., family/order for fishes, genus for echinoderms). At these ranks, imagery provided a higher taxonomic richness for hard-bottom and complex habitats, partially explained by the poor performance of trawling on these rough substrates. For the same reason, the gamma diversity of Pisces and Crustacea was also higher from images, but no difference was observed for echinoderms. On soft bottoms, physical sampling provided higher alpha and gamma diversity for fishes and crustaceans, but these differences tended to decrease for crustaceans identified to the species/morphospecies level from images. Physical sampling and imagery were selective against some taxa (e.g., according to size or behavior), therefore providing different facets of biodiversity. In addition, specimens collected at a larger scale

Man-made floating objects in the surface of tropical oceans, also called drifting fish aggregating devices (DFADs), attract tens of marine species, including tunas and non-tuna species. In the Indian Ocean, around 80% of the sets currently made by the EU purse-seine fleet are on DFADs. Due to the importance and value of this fishery, understanding the habitat characteristics and dynamics of pelagic species aggregated under DFADs is key to improve fishery management and fishing practices. This study implements Bayesian hierarchical spatial models to investigate tuna and non-tuna species seasonal distribution based on fisheries-independent data derived from fishers' echo-sounder buoys, environmental information (Sea Surface Temperature, Chlorophyll, Salinity, Eddie Kinetic Energy, Oxygen concentration, Sea Surface Height, Velocity and Heading) and DFAD variables (DFAD identification, days at sea). Results highlighted group-specific spatial distributions and habitat preferences, finding higher probability of tuna presence in warmer waters, with higher sea surface height and low eddy kinetic energy values. In contrast, highest probabilities of non-tuna species were found in colder and productive waters. Days at sea were relevant for both groups, with higher probabilities at objects with higher soak time. Our results also showed species-specific temporal distributions, suggesting that both tuna and non-tuna species may have different habitat preferences depending on the monsoon period. The new findings provided by this study will contribute to the understanding of the ecology and behavior of target and non-target species and their sustainable management.

The silver-lipped pearl oyster, Pinctada maxima, is the primary species used for the culture of pearls in the Indo-Pacific region. The Western Australian fishery relies on wild-caught animals, and as such, knowledge of the status and distribution of P. maxima underpins sustainable management of the fishery. Eighty Mile Beach, in tropical Western Australia, is the key harvest area for P. maxima, with oysters collected by divers to depths of ∼35 m, although there are anecdotal accounts of oysters beyond diving depths. Image-based, and acoustic methods were used to elucidate distribution patterns of P. maxima off Eighty Mile Beach, including data from 862 km2 of multibeam survey and 119 towed video transects spanning an area from the 20 to 100 m contour lines. We quantified habitat characters including depth, substrate, and benthic community composition associated with pearl oyster distribution. Multibeam sonar data was also coupled with towed video data to produce predictive statistical models of P. maxima habitat. We found P. maxima to depths of 76 m, although more than 90% of individuals occurred shallower than 40 m and less than 2% were found deeper than 50 m. Oysters occupied flat, sandy habitats with neighbouring benthic communities of filter feeders (>98% of observations). These results show P. maxima predominantly occurs in depths <40 m, with no evidence that extensive populations extend into deep water in the region.

Declines in abundance of sea snakes have been observed on reefs throughout the Indo-Pacific, although the reasons are unknown. To date, surveys have occurred on shallow reefs, despite sea snakes occurring over a large depth range. It is not known if populations of sea snakes in deep habitats have undergone similar declines. To address this, we analysed deep-water video data from a historical hotspot of sea snake diversity, Ashmore Reef, in 2004, 2016, and 2021. We collected 288 hours of video using baited remote underwater videos and a remotely operated vehicle at depths between 13 and 112 m. We observed 80 individuals of seven species with Aipysurus laevis (n = 30), Hydrophis peronii (n = 8), and H. ocellatus (n = 6) being the most abundant. Five of the species (A. duboisii, A. apraefrontalis, H. ocellatus, H. kingii, and Emydocephalus orarius) had not been reported in shallow waters for a decade prior to our study. We found no evidence of a decline in sea snakes across years in deep-water surveys, although abundances were lower than those in early shallow-water surveys. A comparison of BRUVS data from 2004 and 2016 was consistent with the hypothesis that predation by sharks may have contributed to the loss of sea snakes in shallow habitats. Our study highlights the use of underwater video to collect information on sea snakes in the mesophotic zone and also suggests that future monitoring should include these depths in order to capture a more complete representation of habitats occupied.

Island ecosystems possess pristine environmental characteristics; human influence poses a serious threat to the fragile and susceptible biological processes on the islands (Sahu et al., 2013; Jha et al., 2015). Isolated oceanic islands support a highly sensitive and fragile coral reef ecosystem that offers unique possibilities to study the ecological changes and consequences that come with human settlement (Jha et al., 2011; Connor et al., 2012; Jha et al., 2013). Coral reefs are vital and core economic assets for any country that lies in the tropical and sub-tropical marine environment. Globally, the estimated economic support from this habitat has been calculated to be $375 billion per year (Cesar and Beukering, 2004; Brander et al., 2007). The important ecological services provided by these coral reef habitats have been identified as fish production, control of soil erosion on land, carbon sequestration, breeding grounds, etc. The coral reefs of Lakshadweep Islands are predominantly occupied by Scleractinian corals at various levels of the benthic substrate such as reef flat lagoon, reef crest, and reef slope. They are under great threat due to natural disturbances (Kumaraguru et al., 2005; Wilson et al., 2005) as well as anthropogenic disturbances (Wilson, 2010). The assessment of the biological indicators of benthic reef habitat is a key factor that helps in understanding the health status of any coral reef ecosystem (Al-Sofyani et al., 2014). The Crown-of-thorns Starfish (Acanthaster planciLinnaeus, 1758) is a major coral predator reported from various coral reef ecosystems. Their devastating population outbreaks have posed a great threat to coral reefs of the Indo-Pacific coastal region in the last five decades (Birkeland and Lukas, 1990; Fabricius et al., 2010). Besides the Crown-of-thorns Starfish, zooxanthellae-consuming gastropods are also reported as indicators for assessing the health status of corals in the Red Sea reef ecosystem (Mohamed et al., 2012;

Sowing seeds for snapper habitat.

Why India needs its fishers to save the vanishing dugongs and their habitat.

Tropical shallow-water habitats represent the marine environments with the greatest biodiversity; however, these habitats are the most vulnerable to climate warming. Corals, seagrasses, and macroalgae play a crucial role in the structure, functions, and processes of the coastal ecosystems. Understanding their growth and physiological responses to elevated temperature and interspecific sensitivity is a necessary step to predict the fate of future coastal community. Six species representatives, including Pocillopora acuta, Porites lutea, Halophila ovalis, Thalassia hemprichii, Padina boryana, and Ulva intestinalis, collected from Phuket, Thailand, were subjected to stress manipulation for 5 days. Corals were tested at 27, 29.5, 32, and 34.5°C, while seagrasses and macroalgae were tested at 27, 32, 37, and 42°C. After the stress period, the species were allowed to recover for 5 days at 27°C for corals and 32°C for seagrasses and macroalgae. Non-destructive evaluation of photosynthetic parameters (Fv/Fm, Fv/F0, ϕPSII and rapid light curves) was carried out on days 0, 3, 5, 6, 8, and 10. Chlorophyll contents and growth rates were quantified at the end of stress, and recovery periods. An integrated biomarker response (IBR) approach was adopted to integrate the candidate responses (Fv/Fm, chlorophyll content, and growth rate) and quantify the overall temperature effects. Elevated temperatures were found to affect photosynthesis, chlorophyll content, and growth rates of all species. Lethal effects were detected at 34.5°C in corals, whereas adverse but recoverable effects were detected at 32°C. Seagrasses and macroalgae displayed a rapid decline in photosynthesis and lethal effects at 42°C. In some species, sublethal stress manifested as slower growth and lower chlorophyll content at 37°C, while photosynthesis remained unaffected. Among all, T. hemprichii displayed the highest thermotolerance. IBR provided evidence that elevated temperature affected the overall perf

A new study has shown that the dottyback, a small predatory reef fish, can change the colour of its body to imitate a variety of other reef fish species, allowing the dottyback to sneak up undetected and eat their young. The dottyback also uses its colour-changing abilities to hide from larger predators by colour-matching to the background of its habitat - disappearing into the scenery.

A new study has shown that the dottyback, a small predatory reef fish, can change the colour of its body to imitate a variety of other reef fish species, allowing the dottyback to sneak up undetected and eat their young. The dottyback also uses its colour-changing abilities to hide from larger predators by colour-matching to the background of its habitat - disappearing into the scenery.

Tiger Sharks' Habitat - Why Do They Dive?

The extreme Western Australia 2011 marine heatwave had a lasting effect on the marine ecosystem and after 7 years, only parts of the ecosystem have showed good signs of recovery. After the heatwave, scallop fisheries in the Abrolhos Is. and Shark Bay were closed for 3-5 years, while the Shark Bay crab fishery was closed for 18 months; these fisheries at the center of the heatwave have shown some improvement due to better protection of spawning stock and improved environmental conditions. Also at the center of the heatwave, Roe's abalone suffered a catastrophic mortality and has not recovered as spawning stock remains very low. The Perth abalone stock which was outside the peak heatwave area had a major stock reduction but remained opened with reduced catches. The heatwave had a marked indirect effect on brown tiger prawns in Exmouth Gulf due to loss of seagrass habitat. The heatwave also resulted in a decline in western king prawn recruitment in Exmouth Gulf, to the north of heatwave center, but an improved recruitment in the cooler waters of Shark Bay. Western rock lobsters near the heatwave peak also appear to have been indirectly affected and have not recovered. Factors influencing the recovery rate from the heatwave appeared to be: species near their upper temperature range and/or sensitive to warming temperatures; spatial overlap between the warming event and species distribution; whether spawning stock was affected to the point of recruitment impairment; life-cycle duration of invertebrate (or habitat) species affected; and management intervention. This study provides a framework for managing the consequences of heatwaves on fisheries by highlighting the value of early identification of the event and its effect on fisheries and having flexible harvest strategies for early management intervention. This is particularly important as long-term increases in water temperatures will increase the frequency of marine heatwave events and the fisheries stocks would hav

Assessments of species distributions are crucial for informing conservation and management action. In this study, we used ensemble modelling to explain the distribution of Near Threatened Indo-Pacific (IP) bottlenose dolphins (Tursiops aduncus) in coastal waters at the North West Cape (NWC), Western Australia (WA), an area encompassing a marine protected area (MPA) and adjacent unprotected coastal waters. Analyses used dolphin sighting data collected during boat-based surveys conducted from 2013 to 2015 and 2018 to 2019. Overall, the distribution of IP bottlenose dolphins was best explained by distance to coast (up to 2,000 m) and distance to boat ramp (up to 7,000 m). Areas of high probability of occurrence for dolphins extended from the tip and down the eastern side of the NWC and overlapped with designated sanctuary zones as well as waters beyond the boundaries of the Ningaloo Marine Park (NMP). Distribution and habitat preferences varied slightly with season. In autumn, dolphin distribution was best explained by distance to coast and water depth with a higher likelihood of observing dolphins 1,000-2,000 m from the coast and in water depths of 7-10 m deep. During winter months, distance to coast (1,000-2,000 m) and sea surface temperature (SST) (21.5-23.5°C) were the most important explanatory variables, with presence in coastal lagoons to the west of the NWC more likely than other seasons. During spring, areas of moderate to high probability of dolphin occurrence were mainly located outside the NMP, with marine park zone (outside the NMP and Sanctuary zones within the NMP, the two zones with the highest probability of IP bottlenose dolphin occurrence) and water depth (waters 7-13 m deep) best explaining dolphin distribution. This study highlights the importance of inshore areas of the NWC for IP bottlenose dolphins and the potential vulnerability of this species to increasing and cumulative anthropogenic stressors associated with these areas. Results

Parties to the Nairobi Convention for the Protection, Management, and Development of the Coastal and Marine Environment of the Eastern Africa region (Nairobi Convention) concluded the 10th Conference of Parties (COP10) today with new actions on protecting critical habitats like mangroves and combating climate change in the region.

The productivity and sustainability of coastal, marine, and estuarine ecosystems are heavily reliant on the quality of coastal waters (JHA et al., 2013; JHA et al., 2015; DHEENAN et al., 2016). These locations are thought to have greater biodiversity than open ocean zones (GRAY, 1997). Among the biological components of soft bottom sediments, macrobenthic organisms are essential for ecosystem functioning (Pandey et al., 2022). They play a vital role in secondary production and nutrient exchange between the pelagic and benthic realms and therefore constitute essential elements of estuarine and coastal habitats (SNELGROVE, 1998) and are a reliable indicator for assessing the biotic integrity of the coastal ecosystem (RYU et al., 2011; Pandey et al., 2021). Due to their sedentary lifestyle, long life cycle, and differential response against the perturbation, they also serve as useful bio-indicator (GESTEIRA-GOMEZet al., 2003) for health monitoring and assessment of coastal ecosystems (GANESH et al., 2014) and evaluating the success of conservation efforts (WINBERGT et al., 2007). Identification of factors responsible for spatiotemporal patterns in macrofaunal assemblages is the primary goal amongst many marine benthic ecological studies (BOLAM et al., 2008; DUTERTRE et al., 2013; PANDEY and GANESH , 2019b). However, such pattern in the benthic community is often hard to predict due to the complex interplay between environmental parameters and biological interactions (ELLIS et al., 2006). The relationship between natural environmental factors and macrobenthos is reported to help delineate faunal distribution patterns, characterising benthic habitats, establish baseline knowledge, and enabling the detection of spatial and temporal variations (BOLAM et al., 2008; SHUMCHENIA and King, 2010; Dutertre et al., 2013). Numerous studies (Van Hoey et al., 2004; Hily et al., 2008; DUTERTRE et al., 2013; Pandey and Ganesh, 2019b) have identified sediment properties as a significan