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David Haow

Diversity of plant parasitic nematodes associated with common beans (Phaseolus vulgaris... - 0 views

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    Common beans (Phaseolus vulgaris L.) are the most important legume staple food in Kenya coming second to maize. In Central Highlands of Kenya, the 0.4-0.5ton ha-1 output is below the genetic yield potential of 1.5-2ton ha-1 partly due pests and diseases. Plant parasitic nematodes (PPN) have been reported to cause yield losses of up to 60% on beans. Though bean production is important in the Central highlands of Kenya, information on PPN associated with the beans in the region is lacking. This study was therefore undertaken to establish the diversity of PPN associated with common beans and to assess the root knot nematode damage on beans in the region. The study covered 50 farms (32 in Kirinyaga and 18 in Embu Counties) distributed in eight localities namely Kibirigwi (L1), Makutano (L2), Kagio (L3), Mwea (L4) and Kutus (L5) in Kirinyaga County and Nembure (L6), Manyatta (L7) and Runyenjes (L8) in Embu County and covering three Agro Ecological Zones (AEZs); UM2 (L1, L2, L3 & L4), UM3 (L5, L7 & L8) and UM4 (L6) AEZs. Manyatta (L7) and Nembure (L6), had the highest and second highest gall indices, respectively, while Kibirigwi (L1), Makutano (L2) and Mwea (L4) had some of the lowest gall indices. The most common PPN in bean roots were Meloidogyne spp. Pratylenchus spp. and Scutellonema spp. with a frequency of 94.38%, 78.25% and 59.13%, respectively. This further confirm the importance of these nematodes in bean production systems. Upper Midland 3 (UM3) AEZs and UM4 had higher nematode population densities and diversity than UM2. Disease severity and nematode composition and distribution were notably low in the irrigated areas Kibirigwi, Kagio and Mwea compared to rain-fed areas such as Makutano, Nembure and Manyatta.
Erich Feldmeier

@biogarage #diversity Kim Hughes: The hottest guy guppies stand out in a crowd | Scienc... - 0 views

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    "Evolution likes to keep what works best. The rest falls by the wayside. In theory, this means that the most "fit" variations, say, a color that looks poisonous or one particularly attractive to the ladies, would become the most common. By this logic, the many colors of the guppy should have conformed to a single common pattern long ago. But they haven't. Instead, the male guppies continue to show not only bright colors but also a high diversity of colors. What keeps the variety going? The rare-male effect. Female guppies prefer the males that are rare, no matter what their color pattern actually is. This effect has been documented in the laboratory in guppies and in other species like fruit flies."
Skeptical Debunker

Radar Map of Buried Martian Ice Adds to Climate Record - NASA Jet Propulsion Laboratory - 0 views

  • The ability of NASA's Mars Reconnaissance Orbiter to continue charting the locations of these hidden glaciers and ice-filled valleys -- first confirmed by radar two years ago -- adds clues about how these deposits may have been left as remnants when regional ice sheets retreated. The subsurface ice deposits extend for hundreds of kilometers, or miles, in the rugged region called Deuteronilus Mensae, about halfway from the equator to the Martian north pole. Jeffrey Plaut of NASA's Jet Propulsion Laboratory, Pasadena, Calif., and colleagues prepared a map of the region's confirmed ice for presentation at this week's 41st Lunar and Planetary Science Conference near Houston. The Shallow Radar instrument on the orbiter has obtained more than 250 observations of the study area, which is about the size of California. "We have mapped the whole area with a high density of coverage," Plaut said. "These are not isolated features. In this area, the radar is detecting thick subsurface ice in many locations." The common locations are around the bases of mesas and scarps, and confined within valleys or craters. Plaut said, "The hypothesis is the whole area was covered with an ice sheet during a different climate period, and when the climate dried out, these deposits remained only where they had been covered by a layer of debris protecting the ice from the atmosphere."
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    Extensive radar mapping of the middle-latitude region of northern Mars shows that thick masses of buried ice are quite common beneath protective coverings of rubble.
Erich Feldmeier

George Dvorsky: The 12 cognitive biases that prevent you from being rational - 1 views

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    "The human brain is capable of 1016 processes per second, which makes it far more powerful than any computer currently in existence. But that doesn't mean our brains don't have major limitations. The lowly calculator can do math thousands of times better than we can, and our memories are often less than useless - plus, we're subject to cognitive biases, those annoying glitches in our thinking that cause us to make questionable decisions and reach erroneous conclusions. Here are a dozen of the most common and pernicious cognitive biases that you need to know about"
Janos Haits

SemLib Project | Semantic tools for digital libraries - 0 views

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    The term Digital Library refers to a wide array of different organisations and collections that share the common trait of exposing digital content to a community of users. Digital libraries are applied in many different contexts ranging from academic institutions to public libraries, archives, museums and industries. The type of content that is stored in digital libraries varies depending on the organisation, it can either be reproduction of physical objects or content which is "born digital".
Janos Haits

Massive open online course - Wikipedia, the free encyclopedia - 0 views

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    A Massive open online course (MOOC) is a course where the participants are distributed and course materials also are dispersed across the web. This is possible only if the course is open, and works significantly better if the course is large. The course is not a gathering, but rather a way of connecting distributed instructors and learners across a common topic or field of discourse.[1] MOOCs are a more recent form of online course development --
Beth Faulkner

Manometric gas permeation analyzer Lyssy L100-5000 - 0 views

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    A versatile gas analyzer for measuring the permeability of any common gas or gas mixture through films and foils.
Janos Haits

Studyplace - 0 views

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    "StudyPlace is a global cultural commons exploring the basic question, what educates?"
Erich Feldmeier

@biogarage Jamil Bhanji, Mauricio Delgado: The social brain and reward: social informat... - 0 views

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    "This research provides an understanding of the neural basis for social behavior from the perspective of how we evaluate social experiences and how our social interactions and decisions are motivated. We review research addressing the common neural systems underlying evaluation of social and nonsocial rewards. The human striatum, known to play a key role in reward processing, displays signals related to a broad spectrum of social functioning, including evaluating social rewards, making decisions influenced by social factors, learning about social others, cooperating, competing, and following social norms. WIREs Cogn Sci 2014, 5:61-73. doi: 10.1002/wcs.1266"
Janos Haits

Real Economy Lab | Real Economy Lab - 0 views

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    The Real Economy Lab provides an interactive platform where the cumulative knowledge, aims, and resources of the movement can be drawn together in order to seek common ground and drive coordinated action
thinkahol *

Jumping genes provide extensive 'raw material' for evolution, study finds - 0 views

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    ScienceDaily (June 2, 2010) - Using high-throughput sequencing to map the locations of a common type of jumping gene within a person's entire genome, researchers at the University of Pennsylvania School of Medicine found extensive variation in these locations among the individuals they studied, further underscoring the role of these errant genes in maintaining genetic diversity.
thinkahol *

Toxoplasmosis and psychology: A game of cat and mouse | The Economist - 0 views

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    There is tantalising evidence that a common parasite may affect human behaviour
Charles Daney

Why sleep? Scientist delves into one of science's great mysteries - 1 views

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    Bats, birds, box turtles, humans and many other animals share at least one thing in common: They sleep. Humans, in fact, spend roughly one-third of their lives asleep, but sleep researchers still don't know why.
Walid Damouny

Researchers explore link between schizophrenia, cat parasite - 1 views

  • There are unusually low rates of schizophrenia and toxoplasmosis in countries where cats are rare, and unusually high rates in places where eating uncooked meat is customary.
    • Walid Damouny
       
      Something serious
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    "Johns Hopkins University scientists trying to determine why people develop serious mental illness are focusing on an unlikely factor: a common parasite spread by cats."
thinkahol *

Curious mathematical law is rife in nature - physics-math - 14 October 2010 - New Scien... - 0 views

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    WHAT do earthquakes, spinning stellar remnants, bright space objects and a host of other natural phenomena have in common? Some of their properties conform to a curious and little known mathematical law, which could now find new uses.
thinkahol *

The gene-environment enigma - 0 views

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    ScienceDaily (Dec. 3, 2010) - Personalized medicine centers on being able to predict the risk of disease or response to a drug based on a person's genetic makeup. But a study by scientists at Washington University School of Medicine in St. Louis suggests that, for most common diseases, genes alone only tell part of the story.
Charles Daney

How many human cancers are caused by viruses? | Mystery Rays from Outer Space - 0 views

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    A virus was recently shown to cause a rare type of human cancer, Merkel cell carcinoma. Does it also cause a more common type of cancer?
Skeptical Debunker

We're so good at medical studies that most of them are wrong - 0 views

  • Statistical validation of results, as Shaffer described it, simply involves testing the null hypothesis: that the pattern you detect in your data occurs at random. If you can reject the null hypothesis—and science and medicine have settled on rejecting it when there's only a five percent or less chance that it occurred at random—then you accept that your actual finding is significant. The problem now is that we're rapidly expanding our ability to do tests. Various speakers pointed to data sources as diverse as gene expression chips and the Sloan Digital Sky Survey, which provide tens of thousands of individual data points to analyze. At the same time, the growth of computing power has meant that we can ask many questions of these large data sets at once, and each one of these tests increases the prospects than an error will occur in a study; as Shaffer put it, "every decision increases your error prospects." She pointed out that dividing data into subgroups, which can often identify susceptible subpopulations, is also a decision, and increases the chances of a spurious error. Smaller populations are also more prone to random associations. In the end, Young noted, by the time you reach 61 tests, there's a 95 percent chance that you'll get a significant result at random. And, let's face it—researchers want to see a significant result, so there's a strong, unintentional bias towards trying different tests until something pops out. Young went on to describe a study, published in JAMA, that was a multiple testing train wreck: exposures to 275 chemicals were considered, 32 health outcomes were tracked, and 10 demographic variables were used as controls. That was about 8,800 different tests, and as many as 9 million ways of looking at the data once the demographics were considered.
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    It's possible to get the mental equivalent of whiplash from the latest medical findings, as risk factors are identified one year and exonerated the next. According to a panel at the American Association for the Advancement of Science, this isn't a failure of medical research; it's a failure of statistics, and one that is becoming more common in fields ranging from genomics to astronomy. The problem is that our statistical tools for evaluating the probability of error haven't kept pace with our own successes, in the form of our ability to obtain massive data sets and perform multiple tests on them. Even given a low tolerance for error, the sheer number of tests performed ensures that some of them will produce erroneous results at random.
Skeptical Debunker

The genetic footprint of natural selection - 0 views

  • During evolution, living species have adapted to environmental constraints according to the mechanism of natural selection; when a mutation that aids the survival (and reproduction) of an individual appears in the genome, it then spreads throughout the rest of the species until, after several hundreds or even thousands of generations, it is carried by all individuals. But does this selection, which occurs on a specific gene in the genome of a species, also occur on the same gene in neighboring species? On which set of genes has natural selection acted specifically in each species? Researchers in the Dynamique et Organisation des Génomes team at the Institut de Biologie of the Ecole Normale Supérieure (CNRS/ENS/INSERM) have studied the genome of humans and three other primate species (chimpanzee, orangutan and macaque) using bioinformatics tools. Their work consisted in comparing the entire genomes of each species in order to identify the genes having undergone selection during the past 200,000 years. The result was that a few hundred genes have recently undergone selection in each of these species. These include around 100 genes detected in man that are shared by two or three other species, which is twice as many as might be anticipated as a random phenomenon. Thus a not inconsiderable proportion of the genes involved in human adaptation are also present in the chimpanzee, orangutan or macaque, and sometimes in several species at the same time. Natural selection acts not only by distancing different species from each other when new traits appear. But by acting on the same gene, it can also give rise to the same trait in species that have already diverged, but still have a relatively similar genome. This study thus provides a clearer understanding of the group of genes that are specifically implicated in human evolution (during the past 200,000 years), as it allows the identification of those genes which did not undergo selection in another primate line. An example that has been confirmed by this study is the well-known case of the lactase gene that can metabolize lactose during adulthood (a clear advantage with the development of agriculture and animal husbandry). The researchers have also identified a group of genes involved in some neurological functions and in the development of muscles and skeleton.
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    A further step has been taken towards our understanding of natural selection. CNRS scientists working at the Institut de Biologie of the Ecole Normale Supérieure (CNRS/ENS/INSERM) have shown that humans, and some of their primate cousins, have a common genetic footprint, i.e. a set of genes which natural selection has often tended to act upon during the past 200,000 years. This study has also been able to isolate a group of genes that distinguish us from our cousins the great apes. Its findings are published in PloS Genetics (26 February 2010 issue).
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