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Erich Feldmeier

Elisabeth Spelke: Large number discrimination in 6-month-old infants - 0 views

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    "Abstract: Babys können rechnen / zählen Six-month-old infants discriminate between large sets of objects on the basis of numerosity when other extraneous variables are controlled, provided that the sets to be discriminated differ by a large ratio (8 vs. 16 but not 8 vs. 12). The capacities to represent approximate numerosity found in adult animals and humans evidently develop in human infants prior to language and symbolic counting."
Erich Feldmeier

Ruth A. Atchley: PLOS ONE: Creativity in the Wild: Improving Creative Reasoning through... - 0 views

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    "Here we show that four days of immersion in nature, and the corresponding disconnection from multi-media and technology, increases performance on a creativity, problem-solving task by a full 50% in a group of naive hikers. Our results demonstrate that there is a cognitive advantage to be realized if we spend time immersed in a natural setting. We anticipate that this advantage comes from an increase in exposure to natural stimuli that are both emotionally positive and low-arousing and a corresponding decrease in exposure to attention demanding technology, which regularly requires that we attend to sudden events, switch amongst tasks, maintain task goals, and inhibit irrelevant actions or cognitions. A limitation of the current research is the inability to determine if the effects are due to an increased exposure to nature, a decreased exposure to technology, or to other factors associated with spending three days immersed in nature."
Skeptical Debunker

We're so good at medical studies that most of them are wrong - 0 views

  • Statistical validation of results, as Shaffer described it, simply involves testing the null hypothesis: that the pattern you detect in your data occurs at random. If you can reject the null hypothesis—and science and medicine have settled on rejecting it when there's only a five percent or less chance that it occurred at random—then you accept that your actual finding is significant. The problem now is that we're rapidly expanding our ability to do tests. Various speakers pointed to data sources as diverse as gene expression chips and the Sloan Digital Sky Survey, which provide tens of thousands of individual data points to analyze. At the same time, the growth of computing power has meant that we can ask many questions of these large data sets at once, and each one of these tests increases the prospects than an error will occur in a study; as Shaffer put it, "every decision increases your error prospects." She pointed out that dividing data into subgroups, which can often identify susceptible subpopulations, is also a decision, and increases the chances of a spurious error. Smaller populations are also more prone to random associations. In the end, Young noted, by the time you reach 61 tests, there's a 95 percent chance that you'll get a significant result at random. And, let's face it—researchers want to see a significant result, so there's a strong, unintentional bias towards trying different tests until something pops out. Young went on to describe a study, published in JAMA, that was a multiple testing train wreck: exposures to 275 chemicals were considered, 32 health outcomes were tracked, and 10 demographic variables were used as controls. That was about 8,800 different tests, and as many as 9 million ways of looking at the data once the demographics were considered.
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    It's possible to get the mental equivalent of whiplash from the latest medical findings, as risk factors are identified one year and exonerated the next. According to a panel at the American Association for the Advancement of Science, this isn't a failure of medical research; it's a failure of statistics, and one that is becoming more common in fields ranging from genomics to astronomy. The problem is that our statistical tools for evaluating the probability of error haven't kept pace with our own successes, in the form of our ability to obtain massive data sets and perform multiple tests on them. Even given a low tolerance for error, the sheer number of tests performed ensures that some of them will produce erroneous results at random.
Skeptical Debunker

The genetic footprint of natural selection - 0 views

  • During evolution, living species have adapted to environmental constraints according to the mechanism of natural selection; when a mutation that aids the survival (and reproduction) of an individual appears in the genome, it then spreads throughout the rest of the species until, after several hundreds or even thousands of generations, it is carried by all individuals. But does this selection, which occurs on a specific gene in the genome of a species, also occur on the same gene in neighboring species? On which set of genes has natural selection acted specifically in each species? Researchers in the Dynamique et Organisation des Génomes team at the Institut de Biologie of the Ecole Normale Supérieure (CNRS/ENS/INSERM) have studied the genome of humans and three other primate species (chimpanzee, orangutan and macaque) using bioinformatics tools. Their work consisted in comparing the entire genomes of each species in order to identify the genes having undergone selection during the past 200,000 years. The result was that a few hundred genes have recently undergone selection in each of these species. These include around 100 genes detected in man that are shared by two or three other species, which is twice as many as might be anticipated as a random phenomenon. Thus a not inconsiderable proportion of the genes involved in human adaptation are also present in the chimpanzee, orangutan or macaque, and sometimes in several species at the same time. Natural selection acts not only by distancing different species from each other when new traits appear. But by acting on the same gene, it can also give rise to the same trait in species that have already diverged, but still have a relatively similar genome. This study thus provides a clearer understanding of the group of genes that are specifically implicated in human evolution (during the past 200,000 years), as it allows the identification of those genes which did not undergo selection in another primate line. An example that has been confirmed by this study is the well-known case of the lactase gene that can metabolize lactose during adulthood (a clear advantage with the development of agriculture and animal husbandry). The researchers have also identified a group of genes involved in some neurological functions and in the development of muscles and skeleton.
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    A further step has been taken towards our understanding of natural selection. CNRS scientists working at the Institut de Biologie of the Ecole Normale Supérieure (CNRS/ENS/INSERM) have shown that humans, and some of their primate cousins, have a common genetic footprint, i.e. a set of genes which natural selection has often tended to act upon during the past 200,000 years. This study has also been able to isolate a group of genes that distinguish us from our cousins the great apes. Its findings are published in PloS Genetics (26 February 2010 issue).
Erich Feldmeier

Welcome to Genspace - 0 views

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    "Remember when science was fun? At Genspace it still is. Genspace is a nonprofit organization dedicated to promoting education in molecular biology for both children and adults. We work inside and outside of traditional settings, providing a safe, supportive environment for training and mentoring in biotechnology."
Janos Haits

Knowledge Media Institute | The Open University - 0 views

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    The Knowledge Media Institute (KMi) was set up in 1995 in recognition of the need for the Open University to be at the forefront of research and development in a convergence of areas that impacted on the OU's very nature: Cognitive and Learning Sciences, Artificial Intelligence and Semantic Technologies, and Multimedia. We chose to call this convergence Knowledge Media. 
Janos Haits

Academic Torrents - 0 views

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    "Currently making 1.67TB of research data available. Sharing data is hard. Emails have size limits, and setting up servers is too much work. We've designed a distributed system for sharing enormous datasets - for researchers, by researchers. The result is a scalable, secure, and fault-tolerant repository for data, with blazing fast download speeds."
Janos Haits

The Open Biological and Biomedical Ontologies - 0 views

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    The OBO Foundry is a collaborative experiment involving developers of science-based ontologies who are establishing a set of principles for ontology development with the goal of creating a suite of orthogonal interoperable reference ontologies in the biomedical domain. The groups developing ontologies who have expressed an interest in this goal are listed below, followed by other relevant efforts in this domain.
Erich Feldmeier

The Amygdala Made Me Do It - NYTimes.com - 0 views

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    "The 18th-century philosopher David Hume (much quoted by Mr. Lehrer) didn't have an M.R.I. scanner at his disposal, but he framed the question in much the same way. His major work, "A Treatise of Human Nature," explored the ways in which habit, or "custom," rules our lives. Hume's experiments with perception - how we respond to colors, distance, numerical sets - prefigure the rigorous science of Professor Kahneman. His intent was to show us "the natural infirmity and unsteadiness both of our imagination and senses." Consciousness, like philosophy itself, stands on a "weak foundation.""
Erich Feldmeier

Faculty Profile - Norbert Schwarz : University of Michigan PSYCHOLOGY DEPARTMENT - 0 views

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    "Metacognitive experiences and the intricacies of setting people straight" decision making by few arguments better than more cognitive greed, info overload http://ed.iiqii.de/gallery/Science-TheOnlyNews/FrontalCortex_wired_com warum wir nur bis 3 zählen können
Erich Feldmeier

Leonard Guarente Longevity Proteins Also May Be Linked To Mood Control - 0 views

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    "Over the last 10 years, MIT biologist Leonard Guarente and other researchers have demonstrated that very-low-calorie diets provoke a comprehensive physiological response, which promotes survival due to a set of proteins called sirtuins. A new report by Guarente published online in Cell has now demonstrated that sirtuins may also have a key part in the psychological response to dietary restriction. "
Erich Feldmeier

Enterotypes of the human gut microbiome : Nature : Nature Publishing Group - 0 views

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    "Our knowledge of species and functional composition of the human gut microbiome is rapidly increasing, but it is still based on very few cohorts and little is known about variation across the world. By combining 22 newly sequenced faecal metagenomes of individuals from four countries with previously published data sets, here we identify three robust clusters (referred to as enterotypes hereafter) that are not nation or continent specific. We also confirmed the enterotypes in two published, larger cohorts, indicating that intestinal microbiota variation is generally stratified, not continuous. This indicates further the existence of a limited number of well-balanced host-microbial symbiotic states that might respond differently to diet and drug intake."
Janos Haits

GeneMANIA - 0 views

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    GeneMANIA helps you predict the function of your favourite genes and gene sets.
Janos Haits

Semantic eScience Framework | Tetherless World Constellation - 0 views

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    The goals of this effort is to design and implement a configurable and extensible semantic eScience framework. Configuration will require some research into accommodating different levels of semantic expressivity and user requirements from use cases. Extensibility will be achieved in a modular approach to the semantic encodings (i.e. ontologies) performed in a community setting, i.e. an ontology framework into which specific applications all the way up to communities can extend the semantics for their needs.
Janos Haits

BrainBrowser - 0 views

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    BrainBrowser is web-based, 3D visualization tool for neuroimaging. Using web-standard technologies, such as WebGL and HTML5, it allows for real time manipulation and analysis of 3D neuroimaging data whether it be precalculated maps, such as the MACACC data set (Mapping Anatomical Correlations Across Cerebral Cortex), or models provided by the user in MNI object format and data in one of the many currently supported formats (Minc, Nifti, object files, plain text).
Erich Feldmeier

Spiegelman: Scientists find molecular link to obesity/insulin resistance in mice - 0 views

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    "For this study, the investigators bred mice lacking TRPV4 or administered a drug to deactivate it. In the absence of TRPV4, white cells turned on a set of genes that consume energy to produce heat, rather than storing the energy as excess fat. This "thermogenic" process normally occurs in brown or beige fat (commonly called "good fat"), which is found mostly in small animals and human infants to protect against cold. When the TRPV4-deficient mice were put on a high-calorie diet for several weeks, they did not become obese, and their level of fat cell inflammation and insulin resistance was lowered. "We have identified a target that, when inhibited, can activate beige adipose tissue and suppress inflammation," said Spiegelman."
Erich Feldmeier

Stanford Bioengineers Introduce 'Bi-Fi' - The Biological Internet | School of Engineering - 0 views

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    "If you were a bacterium, the virus M13 might seem innocuous enough. It insinuates more than it invades, setting up shop like a freeloading houseguest, not a killer. Once inside it makes itself at home, eating your food, texting indiscriminately. Recently, however, bioengineers at Stanford have given M13 a bit of a makeover. The researchers, Monica Ortiz, a doctoral candidate in bioengineering, and Drew Endy, PhD, an assistant professor of bioengineering, have parasitized the parasite and harnessed M13's key attributes - its non-lethality and its ability to package and broadcast arbitrary DNA strands - to create what might be termed the biological Internet, or "Bi-Fi." Their findings were published online Sept. 7 in the Journal of Biological Engineering."
Erich Feldmeier

Homöopathie - Auf der Suche nach dem Nichts - Wissen - Süddeutsche.de - 0 views

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    "An vielen medizinischen Fakultäten blüht die vermeintliche Alternativmedizin. Dennoch, die Forderung, Homöopathie nicht mehr nach den Kriterien der evidenzbasierten Medizin zu überprüfen, ist ein Schuss, der leicht nach hinten losgehen könnte... Selbst manche Vertreter der Homöopathie gestehen heute mehr oder weniger offen ein, dass vermutlich nicht die Globuli heilen, sondern dass das ganze therapeutische Setting wirkt. Die Homöopathie hat nochmals verdeutlicht, wie wichtig der Placebo-Effekt bei den meisten medizinischen Interventionen ist. Bei ihm handelt es sich nicht um eine eingebildete, sondern um eine reale, physiologische Wirkung. Statt sich weiter über irgendwelche Geisterkräfte zu streiten, wäre es wichtig, diesen Mechanismus weiter aufzuklären."
Janos Haits

PlanetData - 0 views

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    "PlanetData aims to establish a sustainable European community of researchers that supports organizations in exposing their data in new and useful ways. The ability to effectively and efficiently make sense out of the enormous amounts of data continuously published online, including data streams, (micro)blog posts, digital archives, eScience resources, public sector data sets, and the Linked Open Data Cloud, is a crucial ingredient for Europe's transition to a knowledge society. It allows businesses, governm"
Erich Feldmeier

Bayer #BioTech #startup #labspace, About the CoLaborator - 0 views

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    "The CoLaborator will be set up in an independent building of 800 square meters at the Bayer research campus in Berlin. There will be about 420 square meters of space for laboratories. Attractively designed laboratory and office modules and shared infrastructure such as a conference room offer ideal conditions for nascent companies - at manageable investment costs. A new home will be established for start-ups in life sciences whose ideas, developments and technology platforms are related to Bayer HealthCare's research interests."
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