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John Smith

Webinar On Statistical Analysis of Gages - 0 views

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    The seminar begins with an examination of the fundamental vocabulary and concepts related to metrology. Topics include: accuracy, precision, calibration, and "uncertainty ratios". Several of the standard methods for analyzing measurement variation are then described and explained, as derived from AIAG's Measurement System Analysis reference book. The methods include: Gage R&R (ANOVA method, for 3 gages, 3 persons, 3 replicates, and 10 parts), Gage Correlation (for 3 gages), Gage Linearity, and Gage Bias. The seminar ends with an explanation of how to combine all relevant uncertainty information into an "Uncertainty Budget" that helps determine the appropriate width of QC specification intervals (i.e., "guard-banded specifications"). Spreadsheets are used to demonstrate how to perform the methods described during the seminar.
Erich Feldmeier

John Graham: Why is there no Nobel Prize in Biology? - 0 views

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    "Sorry but all the Laurets mentioned either received the Nobel Prize for Medicine and Physiology or the Noble Prize for Chemistry. The fact that many of the researchers were working in areas that were not specifically associated with Chemistry or with Physiology and Medicine simply highlights how the criteria have been stretched to accomodate the achievements in Biology for which there is no specific Nobel prize."
Skeptical Debunker

If bonobo Kanzi can point as humans do, what other similarities can rearing reveal? - 0 views

  • The difference between pointing by the Great Ape Trust bonobos - the only ones in the world with receptive competence for spoken English - and other captive apes that make hand gestures is explained by the culture in which they were reared, according to the paper's authors: Janni Pedersen, an Iowa State University Ph.D. candidate conducting research for her dissertation at Great Ape Trust; Pär Segerdahl, a scientist from Sweden who has published several philosophical inquires into language; and William M. Fields, an ethnographer investigating language, culture and tools in non-human primates. Fields also is Great Ape Trust's director of scientific research. Because Kanzi, Panbanisha and Nyota were raised in a culture where pointing has a purpose - The Trust's hallmark Pan/Homo environment, where infant bonobos are reared with both bonobo (Pan paniscus) and human (Homo sapiens) influences - their pointing is as scientifically meaningful as their understanding of spoken English, Fields said. The pointing study supports and builds on previous research on the effect of rearing culture on cognitive capabilities, including the 40-year research corpus of Dr. Duane Rumbaugh, Dr. Sue Savage-Rumbaugh and Fields, which is the foundation of the scientific inquiry at Great Ape Trust. Those studies included the breakthrough finding that Kanzi and other bonobos with receptive competence for spoken English acquired language as human children do - by being exposed to it since infancy. The bonobos adopted finger-pointing behavior for the same reasons, because they were reared in a culture where pointing has meaning.
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    You may have more in common with Kanzi, Panbanisha and Nyota, three language-competent bonobos living at Great Ape Trust, than you thought. And those similarities, right at your fingertip, might one day tell scientists more about the effect of culture on neurological disorders that limit human expression. Among humans, pointing is a universal language, an alternative to spoken words to convey a message. Before they speak, infants point, a gesture scientists agree is closely associated with word learning. But when an ape points, scientists break rank on the question of whether pointing is a uniquely human behavior. Some of the world's leading voices in modern primatology have argued that although apes may gesture in a way that resembles human pointing, the genetic and cognitive differences between apes and humans are so great that the apes' signals have no specific intent. Not so, say Great Ape Trust scientists, who argued in a recently published scientific paper, "Why Apes Point: Pointing Gestures in Spontaneous Conversation of Language-Competent Pan/Homo Bonobos," that not only do Kanzi, Panbanisha and Nyota point with their index fingers in conversation as a human being might, these bonobos do so with specific intent and objectives in mind.
Erich Feldmeier

The Forgotten Domain of the Gut Microbiome - The Extremo Files : The Extremo Files - 0 views

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    "Among the five ape species tested, the "universal" primers detected an average of 6 species per animal. The Archaea-specific primers revealed an average of 95.... By simply looking more closely and more specifically for Archaea, Raymann and her colleagues revealed a conspicuous gap in microbiome research"
Skeptical Debunker

Acupuncture lessens depression symptoms during pregnancy, study shows - 0 views

  • The study authors, led by Rachel Manber, PhD, professor of psychiatry and behavioral sciences, said they hope the results will raise awareness of the problem of depression during pregnancy and provide patients and physicians an alternative to antidepressants. "This standardized acupuncture protocol could be a viable treatment option for depression during pregnancy," they wrote in a paper that will appear in the March issue of Obstetrics & Gynecology. Up to 14 percent of pregnant women may have major depressive disorder, a condition characterized by feelings of dread, gloom and hopelessness, and a loss of interest in normally pleasurable activities. Some women suffer from depression before becoming pregnant, stop taking their medication and then experience a relapse; in other women, pregnancy itself may cause depression.
  • For this study, the researchers recruited 150 women whose pregnancies were between 12 and 30 weeks gestation and who met the criteria for major depressive disorder. The women were randomized to receive one of three treatments: acupuncture specific for depression; control acupuncture, during which needles were inserted in points not known to help alleviate depressive symptoms; or massage. All of the women received eight weeks of therapy and were assessed for depression at the four- and eight-week marks by an interviewer who was unaware of the treatment each woman received. The researchers found that women who received the depression-specific acupuncture experienced a bigger reduction in depression symptoms than the women in the other groups. The response rate — defined as having a 50 percent or greater reduction in symptoms — was 63 percent for the women receiving depression-specific acupuncture, compared with 44 percent for the women in the other two treatment groups combined. The researchers weren't surprised by what they found — a pilot study yielded similar results, and other studies have shown acupuncture is an effective treatment for depression in the general public — but they were pleased with the results. "I don't think that one-size-fits-all treatments are appropriate for everyone, but acupuncture should be considered as an option," said Lyell. "I hope that people will respect the rigorous methodology used in this blinded, randomized, controlled trial and accept the result: Traditional acupuncture was associated with a significant improvement in depression."
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    Acupuncture appears to be an effective way to reduce depression symptoms during pregnancy, according to a first-of-its-kind study from Stanford University School of Medicine researchers.
Skeptical Debunker

The genetic footprint of natural selection - 0 views

  • During evolution, living species have adapted to environmental constraints according to the mechanism of natural selection; when a mutation that aids the survival (and reproduction) of an individual appears in the genome, it then spreads throughout the rest of the species until, after several hundreds or even thousands of generations, it is carried by all individuals. But does this selection, which occurs on a specific gene in the genome of a species, also occur on the same gene in neighboring species? On which set of genes has natural selection acted specifically in each species? Researchers in the Dynamique et Organisation des Génomes team at the Institut de Biologie of the Ecole Normale Supérieure (CNRS/ENS/INSERM) have studied the genome of humans and three other primate species (chimpanzee, orangutan and macaque) using bioinformatics tools. Their work consisted in comparing the entire genomes of each species in order to identify the genes having undergone selection during the past 200,000 years. The result was that a few hundred genes have recently undergone selection in each of these species. These include around 100 genes detected in man that are shared by two or three other species, which is twice as many as might be anticipated as a random phenomenon. Thus a not inconsiderable proportion of the genes involved in human adaptation are also present in the chimpanzee, orangutan or macaque, and sometimes in several species at the same time. Natural selection acts not only by distancing different species from each other when new traits appear. But by acting on the same gene, it can also give rise to the same trait in species that have already diverged, but still have a relatively similar genome. This study thus provides a clearer understanding of the group of genes that are specifically implicated in human evolution (during the past 200,000 years), as it allows the identification of those genes which did not undergo selection in another primate line. An example that has been confirmed by this study is the well-known case of the lactase gene that can metabolize lactose during adulthood (a clear advantage with the development of agriculture and animal husbandry). The researchers have also identified a group of genes involved in some neurological functions and in the development of muscles and skeleton.
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    A further step has been taken towards our understanding of natural selection. CNRS scientists working at the Institut de Biologie of the Ecole Normale Supérieure (CNRS/ENS/INSERM) have shown that humans, and some of their primate cousins, have a common genetic footprint, i.e. a set of genes which natural selection has often tended to act upon during the past 200,000 years. This study has also been able to isolate a group of genes that distinguish us from our cousins the great apes. Its findings are published in PloS Genetics (26 February 2010 issue).
Janos Haits

wise.io | Machine Learning as a Service & Big Data Analytics - 0 views

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    Dead simple machine learning. Our intuitive, easy-to-use platform for machine learning enables anyone to build and deploy models with a few simple clicks. Work in a team? Our platform is specifically designed for collaborative machine learning.
Janos Haits

ScienceWISE - Scientific Web-based Interactive Semantic Environment - 0 views

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    The ScienceWISE.info provides scientists with possibilities of article annotation and scientific bookmarking, helping the international community of physicists to generate dynamically, as a part of their everyday work, an interactive semantic environment, containing a field specific concept ontology with direct ..
Erich Feldmeier

Social evolution: The ritual animal : Nature News & Comment - 0 views

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    "The ritual mind Legare presented Brazilians with a variety of simpatias, and found that people judged them as more effective when they involved a large number of repetitive procedural steps that must be performed at a specific time and in the presence of religious icons. "We're built to learn from others," she says, which leads us to repeat actions that seemed to work for someone else - "even if we don't understand how they produce the desired outcomes"."
Janos Haits

edX - Home - 0 views

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    An open-source online learning platform that will feature teaching designed specifically for the web. Features will include: self-paced learning, online discussion groups, wiki-based collaborative learning, assessment of learning as a student progresses through a course, and online laboratories. The platform will also serve as a ..
Erich Feldmeier

J. Lee, Vincent Harley: The male fight-flight response: MAO-A, A result of SRY regulati... - 0 views

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    "Males and females differ in their biobehavioural response to stress, where males exhibit a heightened sympathetic response to stress compared with females. Specifically, Taylor et al. 1 propose that the classic "fight-or-flight" response to stress is adaptive for males, whilst females engage in a so-called "tend-and-befriend" response to stress. We propose that the Y-chromosome gene, SRY (sex-determining region on the Y chromosome), provides a genetic basis for the heightened sympathetic reactivity to stress and thus predominance of "fight-flight" response in males. Our idea is based on studies that demonstrate (i) the presence of SRY in brain regions and peripheral tissues abundant in catecholamines, (ii) the regulation of catecholamine synthesis and breakdown by SRY, and (iii) the role of SRY in voluntary movement and blood pressure in males"
Janos Haits

Synthetic Biology Open Language - 0 views

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    Synthetic Biology Open Language (SBOL) is a software standard for the electronic exchange of specifications and descriptions of genetic parts, devices, modules, systems, and engineered genomes.
Erich Feldmeier

Hachung Chung Species-Specific Microbes May Be Key to a Healthy Immune System: Scientif... - 0 views

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    "Mice have a jungle of bacteria, viruses and fungi in their stomachs-and so do we. These microorganisms help both mice and us break down dinner. As we are finding, these bugs also help to regulate the immune system. But we are just starting to learn how these tiny organisms influence us and how changing their composition changes us... Interestingly, though, the mice with these microbes did not: their immune systems remained underdeveloped. Even when researchers gave rat microbiota to mice, the mice's immune systems failed to mature"
Erich Feldmeier

One Per Cent: Social network lets people with same gut flora hook up - 0 views

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    "The project was kick-started by a huge public response to the team's research into the genetics of gut bacteria. In a previous study the researchers found that certain gut-specific genetic markers were related to obesity and other diseases. "I got between 50 and 100 e-mails from regular people having problems with the stomach or diarrhoea and wondering if we can help them," Peer Bork, a biochemist and co-creator of MyMicrobes, told Nature. This new website will build on that work, whilst also providing support for concerned members of the public."
Erich Feldmeier

Enterotypes of the human gut microbiome : Nature : Nature Publishing Group - 0 views

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    "Our knowledge of species and functional composition of the human gut microbiome is rapidly increasing, but it is still based on very few cohorts and little is known about variation across the world. By combining 22 newly sequenced faecal metagenomes of individuals from four countries with previously published data sets, here we identify three robust clusters (referred to as enterotypes hereafter) that are not nation or continent specific. We also confirmed the enterotypes in two published, larger cohorts, indicating that intestinal microbiota variation is generally stratified, not continuous. This indicates further the existence of a limited number of well-balanced host-microbial symbiotic states that might respond differently to diet and drug intake."
Erich Feldmeier

Biological Link between Cancer and Depression - The Naked Scientists May 2009 - 0 views

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    "Leah Pyter: Well basically what we know is that patients with cancer have a higher likelihood of also developing depression at some point in their disease progression, so whether that occurred before and is predisposing them to cancer, or it's due to the tumours themselves, or other aspects of having the disease, we don't know. We were only studying right now whether the cancer itself can cause depression. Chris Smith: How could a tumour trigger depression, because a tumour can occur anywhere in the body, therefore at the remote sites in the brain, so how could it trigger changes in brain activity? Leah Pyter: Sure, well what we hypothesized was that the tumours themselves can produce cytokines which has been shown before. Chris Smith: These are inflammatory chemicals that drive the immune system? Leah Pyter: Right, exactly! And there is also a pile of research on how cytokines can access the brain specifically regions of the brain that are associated with depression and anxiety and emotional behaviours, and they can access the brain both tumourally through the blood, or neurally through the vegas nerves. "
Erich Feldmeier

MPG, Michael Czisch: The Seat of Meta-Consciousness in the Brain | Neuroscience News - 0 views

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    "During wakefulness, we are always conscious of ourselves. In sleep, however, we are not. But there are people, known as lucid dreamers, who can become aware of dreaming during sleep. Studies employing magnetic resonance tomography (MRT) have now been able to demonstrate that a specific cortical network consisting of the right dorsolateral prefrontal cortex, the frontopolar regions and the precuneus is activated when this lucid consciousness is attained. All of these regions are associated with self-reflective functions. This research into lucid dreaming gives the authors of the latest study insight into the neural basis of human consciousness."
Erich Feldmeier

The good, the bad, and the ugly: an fMRI invest... [Soc Neurosci. 2006] - PubMed - NCBI - 0 views

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    "Social interactions require fast and efficient person perception, which is best achieved through the process of categorization. However, this process can produce pernicious outcomes, particularly in the case of stigma. This study used fMRI to investigate the neural correlates involved in forming both explicit ("Do you like or dislike this person?") and implicit ("Is this a male or female?") judgments of people possessing well-established stigmatized conditions (obesity, facial piercings, transsexuality, and unattractiveness), as well as normal controls. Participants also made post-scan disgust ratings on all the faces that they viewed during imaging. These ratings were subsequently examined (modeled linearly) in a parametric analysis. Regions of interest that emerged include areas previously demonstrated to respond to aversive and disgust-inducing material (amygdala and insula), as well as regions strongly associated with inhibition and control (anterior cingulate and lateral prefrontal cortex). Further, greater differences in activation were observed in the implicit condition for both the amygdala and prefrontal cortical regions in response to the most negatively perceived faces. Specifically, as subcortical responses (e.g., amygdala) increased, cortical responses (e.g., lateral PFC and anterior cingulate) also increased, indicating the possibility of inhibitory processing. These findings help elucidate the neural underpinnings of stigma"
Janos Haits

Semantic eScience Framework | Tetherless World Constellation - 0 views

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    The goals of this effort is to design and implement a configurable and extensible semantic eScience framework. Configuration will require some research into accommodating different levels of semantic expressivity and user requirements from use cases. Extensibility will be achieved in a modular approach to the semantic encodings (i.e. ontologies) performed in a community setting, i.e. an ontology framework into which specific applications all the way up to communities can extend the semantics for their needs.
Erich Feldmeier

Patricia Springfield: Technology and Informal Education: What Is Taught, What Is Learned - 0 views

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    "Formal education must adapt to these changes, taking advantage of new strengths in visual-spatial intelligence and compensating for new weaknesses in higher-order cognitive processes: abstract vocabulary, mindfulness, reflection, inductive problem solving, critical thinking, and imagination. These develop through the use of an older technology, reading, which, along with audio media such as radio, also stimulates imagination. Informal education therefore requires a balanced media diet using each technology's specific strengths in order to develop a complete profile of cognitive skills. "
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