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Skeptical Debunker

The genetic footprint of natural selection - 0 views

  • During evolution, living species have adapted to environmental constraints according to the mechanism of natural selection; when a mutation that aids the survival (and reproduction) of an individual appears in the genome, it then spreads throughout the rest of the species until, after several hundreds or even thousands of generations, it is carried by all individuals. But does this selection, which occurs on a specific gene in the genome of a species, also occur on the same gene in neighboring species? On which set of genes has natural selection acted specifically in each species? Researchers in the Dynamique et Organisation des Génomes team at the Institut de Biologie of the Ecole Normale Supérieure (CNRS/ENS/INSERM) have studied the genome of humans and three other primate species (chimpanzee, orangutan and macaque) using bioinformatics tools. Their work consisted in comparing the entire genomes of each species in order to identify the genes having undergone selection during the past 200,000 years. The result was that a few hundred genes have recently undergone selection in each of these species. These include around 100 genes detected in man that are shared by two or three other species, which is twice as many as might be anticipated as a random phenomenon. Thus a not inconsiderable proportion of the genes involved in human adaptation are also present in the chimpanzee, orangutan or macaque, and sometimes in several species at the same time. Natural selection acts not only by distancing different species from each other when new traits appear. But by acting on the same gene, it can also give rise to the same trait in species that have already diverged, but still have a relatively similar genome. This study thus provides a clearer understanding of the group of genes that are specifically implicated in human evolution (during the past 200,000 years), as it allows the identification of those genes which did not undergo selection in another primate line. An example that has been confirmed by this study is the well-known case of the lactase gene that can metabolize lactose during adulthood (a clear advantage with the development of agriculture and animal husbandry). The researchers have also identified a group of genes involved in some neurological functions and in the development of muscles and skeleton.
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    A further step has been taken towards our understanding of natural selection. CNRS scientists working at the Institut de Biologie of the Ecole Normale Supérieure (CNRS/ENS/INSERM) have shown that humans, and some of their primate cousins, have a common genetic footprint, i.e. a set of genes which natural selection has often tended to act upon during the past 200,000 years. This study has also been able to isolate a group of genes that distinguish us from our cousins the great apes. Its findings are published in PloS Genetics (26 February 2010 issue).
anonymous

Making More Than Monetary Profit Through Natural Farming Methods - 1 views

The highly mechanized generation that we live in has a far better taste for short-term monetary gains than hard earned ecological and social benefits. A large number of activities are influenced by...

crop production Natural farming organic farming

started by anonymous on 09 Jan 15 no follow-up yet
Erich Feldmeier

Jeremy Ginsberg: Grippe, Detecting influenza epidemics using search engine query data :... - 0 views

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    "Seasonal influenza epidemics are a major public health concern, causing tens of millions of respiratory illnesses and 250,000 to 500,000 deaths worldwide each year1. In addition to seasonal influenza, a new strain of influenza virus against which no previous immunity exists and that demonstrates human-to-human transmission could result in a pandemic with millions of fatalities2. Early detection of disease activity, when followed by a rapid response, can reduce the impact of both seasonal and pandemic influenza3, 4. One way to improve early detection is to monitor health-seeking behaviour in the form of queries to online search engines, which are submitted by millions of users around the world each day. Here we present a method of analysing large numbers of Google search queries to track influenza-like illness in a population."
Erich Feldmeier

Enterotypes of the human gut microbiome : Nature : Nature Publishing Group - 0 views

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    "Our knowledge of species and functional composition of the human gut microbiome is rapidly increasing, but it is still based on very few cohorts and little is known about variation across the world. By combining 22 newly sequenced faecal metagenomes of individuals from four countries with previously published data sets, here we identify three robust clusters (referred to as enterotypes hereafter) that are not nation or continent specific. We also confirmed the enterotypes in two published, larger cohorts, indicating that intestinal microbiota variation is generally stratified, not continuous. This indicates further the existence of a limited number of well-balanced host-microbial symbiotic states that might respond differently to diet and drug intake."
evo ata

Future Human Evolution - 0 views

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    Scientific and speculative articles about the future of human evolution regarding to artificial intelligence, genetic engineering, transhumanism, nanotechnology, space colonization, time travel, life extension and human enhancement
anonymous

Genetic Modification Of Plants: A Natural Method! - 1 views

New qualities acquainted with harvest plants by genetic engineering can possibly build good yields, enhance horticultural practices, or add nourishing quality to items. Case in point, genetically m...

modified plants genetically crops microbial genetics science research Trivedi Effect the

started by anonymous on 02 Jan 15 no follow-up yet
Charles Daney

One step to human pluripotency :The Scientist [28th August 2009] - 0 views

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    Researchers have regressed human stem cells to an embryonic state using just a single transcription factor, as opposed to the four factors previously needed to induce pluripotency in human cells, according to a study published online today (August 28) in Nature.
Erich Feldmeier

Marta Soares Tactile stimulation lowers stress in fish : Nature Communications : Nature... - 0 views

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    "In humans, physical stimulation, such as massage therapy, reduces stress and has demonstrable health benefits. Grooming in primates may have similar effects but it remains unclear whether the positive effects are due to physical contact or to its social value. Here we show that physical stimulation reduces stress in a coral reef fish, the surgeonfish Ctenochaetus striatus. These fish regularly visit cleaner wrasses Labroides dimidiatus to have ectoparasites removed. The cleanerfish influences client decisions by physically touching the surgeonfish with its pectoral and pelvic fins, a behaviour known as tactile stimulation. We simulated this behaviour by exposing surgeonfish to mechanically moving cleanerfish models. Surgeonfish had significantly lower levels of cortisol when stimulated by moving models compared with controls with access to stationary models. Our results show that physical contact alone, without a social aspect, is enough to produce fitness-enhancing benefits, a situation so far only demonstrated in humans"
Janos Haits

The Stanford NLP (Natural Language Processing) Group - 0 views

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    "The Natural Language Processing Group at Stanford University is a team of faculty, research scientists, postdocs, programmers and students who work together on algorithms that allow computers to process and understand human languages. Our work ranges from basic research in computational linguistics to key applications in human language technology, and covers areas such as sentence understanding, machine translation, probabilistic parsing and tagging, biomedical information extraction, grammar induction, word sense disambiguation, automatic question answering, and text to 3D scene generation."
thinkahol *

What the science of human nature can teach us : The New Yorker - 5 views

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    How the new sciences of human nature can help make sense of a life.
Erich Feldmeier

The Amygdala Made Me Do It - NYTimes.com - 0 views

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    "The 18th-century philosopher David Hume (much quoted by Mr. Lehrer) didn't have an M.R.I. scanner at his disposal, but he framed the question in much the same way. His major work, "A Treatise of Human Nature," explored the ways in which habit, or "custom," rules our lives. Hume's experiments with perception - how we respond to colors, distance, numerical sets - prefigure the rigorous science of Professor Kahneman. His intent was to show us "the natural infirmity and unsteadiness both of our imagination and senses." Consciousness, like philosophy itself, stands on a "weak foundation.""
Janos Haits

Kismet - 0 views

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    The Sociable Machines Project develops an expressive anthropomorphic robot called Kismet that engages people in natural and expressive face-to-face interaction. Inspired by infant social development, psychology, ethology, and evolution, this work integrates theories and concepts from these diverse viewpoints to enable Kismet to enter into natural and intuitive social interaction with a human caregiver and to learn from them, reminiscent of parent-infant exchanges.
thinkahol *

Anatomically distinct dopamine release during anticipation and experience of peak emoti... - 0 views

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    Music, an abstract stimulus, can arouse feelings of euphoria and craving, similar to tangible rewards that involve the striatal dopaminergic system. Using the neurochemical specificity of [11C]raclopride positron emission tomography scanning, combined with psychophysiological measures of autonomic nervous system activity, we found endogenous dopamine release in the striatum at peak emotional arousal during music listening. To examine the time course of dopamine release, we used functional magnetic resonance imaging with the same stimuli and listeners, and found a functional dissociation: the caudate was more involved during the anticipation and the nucleus accumbens was more involved during the experience of peak emotional responses to music. These results indicate that intense pleasure in response to music can lead to dopamine release in the striatal system. Notably, the anticipation of an abstract reward can result in dopamine release in an anatomical pathway distinct from that associated with the peak pleasure itself. Our results help to explain why music is of such high value across all human societies.
anonymous

Transform To Sustainable Agriculture Today! - 2 views

Agriculture in the fast paced world requires many resources for faster growth and serving. But using lots of resources for this generation and leaving the next generation helpless is not good. Main...

sustainable agriculture natural farming agricultural science Trivedi Effect organic agriculture science research trivedi science

started by anonymous on 29 Dec 14 no follow-up yet
Ivan Pavlov

Skull suggests three early human species were one - 0 views

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    One of the most complete early human skulls yet found suggests that what scientists thought were three hominin species may in fact be one. This controversial claim comes from a comparison between the anatomical features of a 1.8-million-year-old fossil skull with those of four other skulls from the same excavation site at Dmanisi, Georgia. The wide variability in their features suggests that Homo habilis, Homo rudolfensis and Homo erectus, the species so far identified as existing worldwide in that era, might represent a single species.
Skeptical Debunker

Human cells exhibit foraging behavior like amoebae and bacteria - 0 views

  • "As far as we can tell, this is the first time this type of behavior has been reported in cells that are part of a larger organism," says Peter T. Cummings, John R. Hall Professor of Chemical Engineering, who directed the study that is described in the March 10 issue of the Public Library of Science journal PLoS ONE. The discovery was the unanticipated result of a study the Cummings group conducted to test the hypothesis that the freedom with which different cancer cells move - a concept called motility - could be correlated with their aggressiveness: That is, the faster a given type of cancer cell can move through the body the more aggressive it is. "Our results refute that hypothesis—the correlation between motility and aggressiveness that we found among three different types of cancer cells was very weak," Cummings says. "In the process, however, we began noticing that the cell movements were unexpectedly complicated." Then the researchers' interest was piqued by a paper that appeared in the February 2008 issue of the journal Nature titled, "Scaling laws of marine predator search behaviour." The paper contained an analysis of the movements of a variety of radio-tagged marine predators, including sharks, sea turtles and penguins. The authors found that the predators used a foraging strategy very close to a specialized random walk pattern, called a Lévy walk, an optimal method for searching complex landscapes. At the end of the paper's abstract they wrote, "...Lévy-like behaviour seems to be widespread among diverse organisms, from microbes to humans, as a 'rule' that evolved in response to patchy resource distributions." This gave Cummings and his colleagues a new perspective on the cell movements that they were observing in the microscope. They adopted the basic assumption that when mammalian cells migrate they face problems, such as efficiently finding randomly distributed targets like nutrients and growth factors, that are analogous to those faced by single-celled organisms foraging for food. With this perspective in mind, Alka Potdar, now a post-doctoral fellow at Case Western Reserve University and the Cleveland Clinic, cultured cells from three human mammary epithelial cell lines on two-dimensional plastic plates and tracked the cell motions for two-hour periods in a "random migration" environment free of any directional chemical signals. Epithelial cells are found throughout the body lining organs and covering external surfaces. They move relatively slowly, at about a micron per minute which corresponds to two thousandths of an inch per hour. When Potdar carefully analyzed these cell movements, she found that they all followed the same pattern. However, it was not the Lévy walk that they expected, but a closely related search pattern called a bimodal correlated random walk (BCRW). This is a two-phase movement: a run phase in which the cell travels primarily in one direction and a re-orientation phase in which it stays in place and reorganizes itself internally to move in a new direction. In subsequent studies, currently in press, the researchers have found that several other cell types (social amoeba, neutrophils, fibrosarcoma) also follow the same pattern in random migration conditions. They have also found that the cells continue to follow this same basic pattern when a directional chemical signal is added, but the length of their runs are varied and the range of directions they follow are narrowed giving them a net movement in the direction indicated by the signal.
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    When cells move about in the body, they follow a complex pattern similar to that which amoebae and bacteria use when searching for food, a team of Vanderbilt researchers have found. The discovery has a practical value for drug development: Incorporating this basic behavior into computer simulations of biological processes that involve cell migration, such as embryo development, bone remodeling, wound healing, infection and tumor growth, should improve the accuracy with which these models can predict the effectiveness of untested therapies for related disorders, the researchers say.
Charles Daney

How to ID human pluripotency :The Scientist - 0 views

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    Stem cell researchers must take more care in identifying true pluripotency in reprogrammed human cells, according to a study published online today (October 11) in Nature Biotechnology. The paper outlines strict molecular criteria for recognizing pluripotency, and warns that relying on just a single marker will muddle the field.
thinkahol *

High-dose opiates could crack chronic pain : Nature News & Comment - 0 views

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    Has a cheap and effective treatment for chronic pain been lying under clinicians' noses for decades? Researchers have found that a very high dose of an opiate drug that uses the same painkilling pathways as morphine can reset the nerve signals associated with continuous pain - at least in rats. If confirmed in humans, the procedure could reduce or eliminate the months or years that millions of patients spend on pain-managing prescription drugs. The results of the study are described today in Science1.
nadimmolla

Human Nature - 0 views

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    Here are the most interesting, amazing and unusual things that happened in the world of science this week. A recap of Live Science's
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