Group items tagged

Course notes with informative table on bacterial evolution and notes about endosymbiosis.

The Australian Stem Cell Centre (ASCC), developed the following fact sheets in respect of stem cell science and related topics. Please note that whilst the Fact Sheets were updated shortly before the ASCC closed in 2011, users should note that they are no longer being updated and be aware that the content in them may be out of date. Although the content of the fact sheets is unlikely to have been superseded please do not rely on them for any decision-making purposes and they should be used as part of a wider reading program on the subjects.

A Participation Quiz /Group Feedback is a strategy to help establish or reinforce norms for group work in a cooperative environment. While students work together in their group on a math task, the teacher takes public notes-on a document camera, white board, chart paper, or overhead projector-about the quality of their group work (social moves) and the quality of their mathematical discussions (math moves). The teacher can take notes on how students work together, their use of classroom norms, or the specific language they use to communicate their mathematical ideas.

This "clicker case" gives students an opportunity to apply their understanding of three different types of selection (directional, stabilizing, and disruptive) to a variety of model systems. The case describes each type of selection in detail, presents a paradigm case of each, and then uses clicker questions to test whether students can identify the mode of selection in other systems (answers included in the teaching notes).  Nine different studies are presented so that students gain a broad understanding of selection and how environmental factors can impact species differently. The case concludes with an optional discussion activity (also discussed in the teaching notes) to deepen understanding. Although designed for a high school classroom, it could easily be used in a lower-level college course as an engaging introduction or review of concepts. The case could be used at the beginning of an evolution unit, but it would be helpful if the students were familiar with natural selection before completing the activity.

As you read the chapters in Stiff, attach a post-it note to pages where you highlight something interesting. You should have 4-10 Post-It's per chapter, use the following symbol guide to create your notes. Stiff has 12 chapters, you are only required to map (Post-It) 8 of those chapters. You are welcome to read them all, of course, but you can also choose to focus on chapters that interest you the most or skip those you do not find interesting. You may wish to skim the chapters or browse the table of contents. Each Post-It will contain three items 1. Symbol (see chart) 2. Page and paragraph number 3. Content

This case study synthesizes students' knowledge of the central dogma and cell structure by examining a rare health disorder in order to understand protein targeting and its medical consequences. Students first identify the molecular alteration in affected members of a family with renal Fanconi syndrome as reported in the New England Journal of Medicine (2014). Students then use an online bioinformatics tool to analyze the wildtype and mutant proteins and examine their subcellular localization. Finally, students use this information to explain the symptoms of affected family members. The case is delivered with a PowerPoint presentation that includes a selection of brainstorming prompts and "clicker questions." Students complete a worksheet (included in the teaching notes) before class, making the activity suitable for a flipped classroom. A second worksheet (also included in the teaching notes) is completed during class. The case is written for an introductory biology course for majors, but could also be used as a unit capstone in a non-majors human biology course; the case is also scalable to upper division courses in physiology that specifically explore kidney function.

Ability to read and comprehend complex text, while taking concise notes that reflect this comprehension

Genetics open courseware at MIT, lecture notes, problem sets, exams, study materials

This directed case study follows two college roommates, Darrell and Anthony, who have just returned to school after winter vacation. They share that their ageing fathers are concerned about their declining faculties and are amused by their fathers' efforts to reverse the process.  Darrell's dad plays "brain games" on the computer while Anthony's father believes running will slow his memory decline. Intrigued, the roommates search through their biopsychology class notes to find out whether their fathers are correct. They review the topics of synaptic formation and plasticity, including axonal and dendritic development, and chemical factors in the brain that promote the survival and growth of neurons or stop the genetically programmed death of neurons. Based on research findings, students reading this case will decide whether Darrell and Anthony's fathers are correct in their assertions. The case is appropriate for a wide variety of courses including introductory anatomy or physiology, or for upper-division biopsychology, biology, or neuroscience courses.

Six years ago, Yale University's Stephen Stearns and colleagues took advantage of a long-running study in Framingham, Massachusetts, to assess whether the effects of natural selection could be discerned among the people in the multigenerational study population. Over the last seven decades, public-health researchers have been monitoring the residents of Framingham, noting their vital statistics as well as blood sugar and cholesterol levels to understand the factors that lead to heart disease. As the initial group of research subjects got older, the study started to include their children, and then their grandchildren. The records provide a unique view of the health of a segment of the American population since 1948.

In this audio slide show, Dr. Dana Dolinoy of Duke University explains the role that the epigenome, a sort of second genome, plays in regulating the expression of our genes. As Dolinoy notes, we can no longer say with certainty whether genetics or the environment have a greater impact on our health, because the two are inextricably linked through the epigenome.

Browse the collection of free notes, activities, labs, lesson plans, and other course materials in the Worksheets and Lesson Plans section.

This case study centers on an active teaching game that simulates a cholera outbreak among five villages along a river, similar to the Haitian outbreak of 2010. By enacting the behaviors of fictional villagers, students learn how trade, travel, sanitation practices and geographic location contribute to the spread of diarrheal disease. Documenting various contamination events of village water supplies allows students to trace the progression of the disease and illustrates how adequate sanitation facilities provide protection against the bacteria Vibrio cholera. Originally designed for an undergraduate upper-division biology course focusing on the epidemiology of diseases, the simulation is also appropriate for microbiology and public health courses, as well as lower division undergraduate biology courses and high school. Biology or epidemiology components of the case study can be highlighted depending on the emphasis of the course being taught. The game can be completed within a 45- to 60-minute class period. Playing cards are available from the Supplemental Materials tab; detailed instructions are found in the teaching notes.

Students who used longhand remembered more and had a deeper understanding of the material

This case study examines a variety of biological factors that may have been involved in the 2013 dolphin "unusual mortality event" (UME) on the East Coast of the United States. The story follows a news reporter and four different scientists who are preparing their notes for speaking at a public hearing about the dolphin die-off event. After reading the story, students assume the roles of these scientists and use the jigsaw method to gather, analyze, and share information.  Due to the interdisciplinary nature of environmental toxicology, this case study exposes students to four main topics: ecology of ecosystems, endocrine system/chemical messaging, immune system function, and virus biology.

This clicker case addresses several important concepts related to evolution. First, it explores artificial selection and selective breeding. Charles Darwin used artificial selection as an example to support his Theory of Evolution by Natural Selection. Belyaev's Fox-Farm experiment is used as an example of a study that used selective breeding as the primary experimental procedure to investigate changes in a lineage. Second, it addresses an interesting observation made by Charles Darwin in The Origin of Species in which he noted how domesticated species also show interesting traits such as drooping ears which seem to be common in domesticated species. The "Farm-Fox Experiment" not only demonstrates how a research team can thoroughly investigate an intriguing question, but also serves as a classic example of elegant experimental design. Designed for use in a large introductory-level biology class, this case study would also be appropriate for smaller classes as well as for upper-level evolution courses.

Single cell moving toward a micropipette containing the chemoattractant cAMP. Note that the cell changes direction in response to movement of the micropipette by extending a new pseudopod in the direction of the pipette tip.

This game helps students to enjoy reviewing vocabulary related to cells, organelles, and the plasma membrane.  Each card in the deck has a target vocabulary word and two related taboo words that the student may not use as he/she gives clues so the other students in his/her small group can guess the target word.  Many students have trouble learning the substantial new vocabulary required for biology, and this game lets students have fun while reinforcing their understanding of key terms.  The first file below provides the master copy for creating the card decks for this game, and the second file below provides the teacher notes, including instructions for playing the game.

This case study presents the story of Phil, an undergraduate majoring in biology, whose Russian cousin Dimitri has contracted tuberculosis (TB) from inmates at the prison where he works.  Phil learns that his cousin's failure to complete his antibiotic regimen likely contributed to the evolution of antibiotic-resistant TB in his body.  Phil consults with his friend Stacy, and together they try to understand Dimitri's condition by applying what they are learning in their genetics lab experiment about the role of random mutation in bacterial evolution (including the development of antibiotic resistance) through Luria- Delbrück fluctuation analysis. The same analysis includes calculation of the mutation rate, which Phil realizes is sufficient to cause MRSA and other antibiotic-resistant infections. This case study was originally developed for concurrent use in freshman/sophomore-level genetics, elementary statistics, and precalculus. However, it is also very appropriate for courses in introductory biology, evolutionary biology, and biostatistics. The teaching notes discuss various ways to run the case depending on the mathematics and biology background of students.

This case study presents the fictional tale of two neighboring towns that have recently experienced a growth boom and are now suffering the environmental consequences. The case provides an opportunity to explore a wide variety of anthropogenic causes of natural capital degradation. Students are assigned the role of scientists working for the regional Department of Environmental Resources Management, and it is their job to discover the underlying causes for a wide variety of citizen complaints and to suggest reasonable and cost effective solutions. The case may be assigned as a recap activity after teaching a unit on natural capital degradation. The case includes a PowerPoint presentation as well as three lab activities that are included in the teaching notes. The case would be appropriate for high school or lower level undergraduate ecology or environmental science courses.