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A course in information studies was partly held in the virtual world of Second Life. Second Life was used as a platform to deliver lectures and as a place for organizing group assignments and having discussions. Students' opinions about Second Life were studied and compared to their opinions about more traditional methods in education. The results show a lower threshold for participation in lectures. According to the students, Second Life should not replace face-to-face education, but it could serve as an excellent addition to other more traditional methods and platforms used in education. The students also considered that lectures held in Second Life were much more "fun" than those using other methods. This particular aspect, and its effect on learning outcomes, requires further research. This research demonstrates that Second Life has potential as a learning environment in distance education.

The Tree of Life Web Project (ToL) is a collaborative effort of biologists and nature enthusiasts from around the world. On more than 10,000 World Wide Web pages, the project provides information about biodiversity, the characteristics of different groups of organisms, and their evolutionary history (phylogeny). Each page contains information about a particular group, e.g., salamanders, segmented worms, phlox flowers, tyrannosaurs, euglenids, Heliconius butterflies, club fungi, or the vampire squid. ToL pages are linked one to another hierarchically, in the form of the evolutionary tree of life. Starting with the root of all Life on Earth and moving out along diverging branches to individual species, the structure of the ToL project thus illustrates the genetic connections between all living things.

Welcome to the biology portal. Biology, from the Greek words bios (life) and the suffix -ology, meaning study of, is a branch of science. It is concerned with the characteristics and behaviors of organisms, how species and individuals come into existence, and the interactions they have with each other and with their environment. Biology encompasses a broad spectrum of academic fields that are often viewed as independent disciplines. Together, they study life over a wide range of scales.

There is a growing community interest in applying Semantic Web and Web 2.0 technologies in health care and life sciences areas including the Health Care and Life Sciences Interest Group (HCLSIG ; http://www.w3.org/2001/sw/hcls/) and Medicine 2.0 (http://www.medicine20congress.com/). This has motivated us to explore how to intersect these two sets of technologies in the context of the HCLS Knowledge Base (KB).

I also contend that thrivability goes beyond sustainability by including social justice. It is not enough to find ways to sustain life and human life on the planet. Real thrivability means no one gets left behind in poverty, exposed unfairly to disaster, or suffers at the hand of corrupt governments.

WikiGenes is the first wiki system to combine the collaborative and largely altruistic possibilities of wikis with explicit authorship. In view of the extraordinary success of Wikipedia there remains no doubt about the potential of collaborative publishing, yet its adoption in science has been limited. Here I discuss a dynamic collaborative knowledge base for the life sciences that provides authors with due credit and that can evolve via continual revision and traditional peer review into a rigorous scientific tool.

This summary was born out of a question on Twitter and percolated to FriendFeed, which was "Who is using RDF and integrating other resources at the minute and what are those resources? From this question, several resources were highlighted

Search and get life science PDFs right away at pubget.com

BioForge was created to encourage online collaborations between diverse research groups under BiOS-based licensing schemes. CAMBIA believes that enabling technologies in the life sciences need to remain available to anyone to improve or use in new innovations, both commercial and non-commercial.

See also: http://lists.w3.org/Archives/Public/semantic-web/2008Apr/0005.html NaturalOWL is an open-source natural language generation engine written in Java. It produces descriptions of individuals (e.g., items for sale, museum exhibits) and classes (e.g., types of exhibits) in English and Greek from OWL DL ontologies. The ontologies must have been annotated in RDF with linguistic and user modeling resources. We demonstrate a plug-in for Protege that can be used to produce these resources and to generate texts by invoking NaturalOWL. We also demonstrate how NaturalOWL can be used by robotic avatars in Second Life to describe the exhibits of virtual museums. NaturalOWL demonstrates the benefits of Natural Language Generation (NLG) on the Semantic Web. Organizations that need to publish information about objects, such as exhibits or products, can publish OWL ontologies instead of texts. NLG engines, embedded in browsers or Web servers, can then render the ontologies in multiple natural languages, whereas computer programs may access the ontologies directly.

Businesses are moving beyond marketing in virtual worlds and are exploring other applications of virtual worlds (see a recent BusinessWeek article & slideshow). Enabling collaboration among remote workers is one such application (see our past posts and paper on this topic). A variety of virtual world options or platforms have been available for supporting remote work and these include Second Life, Qwaq, Forterra, and Tixeo. Last week I had the rare opportunity to see an emerging virtual world called Wonderland, the product of an open source project, Project Wonderland, sponsored by Sun Microsystems. During a conference call with our colleague Nicole Yankelovich, Principal Investigator of the Collaborative Environments Project at Sun Microsystems, Becky Jestice and I were lucky enough to get a tour of Wonderland. Nicole graciously spent over an hour to show us some of the impressive features of Wonderland. The tour was so impressive that I want to devote a post to some key aspects of Wonderland: * Virtual meeting participants can use voice to communicate with one another; * If necessary, participants can connect to a Wonderland meeting via telephone; * Private conversations between participants are possible in a virtual meeting; * Participants can share applications; and * Anyone can try out Wonderland (see instructions below).

PMOG is an infinite game built on individual network histories, transforming our web surfing into ongoing social play. With a game head-up display in Firefox, players can bomb each other, wage war over web sites, and lead other users on web missions. Ordinary web sites become caches for items and currency. PMOG fuses an MMO into our WWW. PMOG stands for Passively Multiplayer Online Game. Players play without playing; clicking around the internet turns into experience points and currency. This unconventional massively multiplayer online game merges your web life with an alternate, hidden reality. The mundane takes on a layer of fantastic achievement. Player behavior generates characters and alliances, triggers interactions in the environment, and earns the player points to spend online beefing up their inventory. Suddenly the internet is not a series of untouchable exhibits, but a hackable, rewarding environment.

The prototype we describe is a biomedical knowledge base, constructed for a demonstration at Banff WWW2007 , that integrates 15 distinct data sources using currently available Semantic Web technologies such as the W3C standard Web Ontology Language [OWL] and Resource Description Framework [RDF]. This report outlines which resources were integrated, how the knowledge base was constructed using free and open source triple store technology, how it can be queried using the W3C Recommended RDF query language SPARQL [SPARQL], and what resources and inferences are involved in answering complex queries. While the utility of the knowledge base is illustrated by identifying a set of genes involved in Alzheimer's Disease, the approach described here can be applied to any use case that integrates data from multiple domains.

The SciLands is a mini-continent and user community in the virtual world platform Second Life devoted exclusively to science and technology. There are over 20 science and technology related organizations in the SciLands, including government agencies, universities and museums.

The Bio2RDF project is a tool to convert bioinformatics data and knowledge bases to RDF format. It is a kind of generalized rdfizer for bioinformatics applications, and it is a place for the semantic web life science community to develop and grow.

OpenSimulator is a 3D Application Server. It can be used to create a 3D Virtual World (ala Second Life(tm)), and includes facilities for creating custom avatars, chatting with others in the environment, building 3D content in world, and creating complex 3D applications in world. OpenSimulator can also be extended via loadable modules or web service interfaces to build more custom 3D Applications. OpenSimulator is released under a BSD License, making it both open source, and commercially friendly to embed in products.

Working with Tine 2.0 is fun and eases the workaday life! Due to its enormous user acceptance it activates synergies in your whole organisation. Tine 2.0 is an open source business collaboration software covering Groupware, CRM and ERP aspects.

Soil organic matter is what makes dirt fertile and able to support plant life - both of which are especially important for agriculture. Organic matter retains water in the soil and prevents erosion. Natural processes of decomposition of soil organic matter provide plants and microbes with the energy source and water they need to grow, and carbon is released into the atmosphere as a by-product of this process. Warming temperatures are expected to speed up this process which will increase the amount of CO2 that is transferred to the atmosphere.

A new model of evolution's origins traces the possible outlines of a critical and mysterious stage in Earth's infancy, when a few odd chemicals developed into the molecular ancestors of life as we know it.

Using homemade lab equipment and the wealth of scientific knowledge available online, these hobbyists are trying to create new life forms through genetic engineering - a field long dominated by Ph.D.s toiling in university and corporate laboratories.