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The Society for Integrative and Comparative Biology (SICB) is one of the largest and most prestigious professional associations of its kind. Formed as the American Society of Zoologists through a 1902 merger of two societies, the Central Naturalists and the American Morphological Society, its focus has remained to integrate the many fields of specialization which occur in the broad field of biology. Throughout most of its history the society was known as the American Society of Zoologists and changed its name to the Society for Integrative and Comparative Biology in 1996 to reflect the scientific breadth, integrative approaches, and interests of its membership across all disciplines of biology. The SICB is organized around disciplinary divisions, each relevant to a major segment of biology.

Semantic technologies are playing an an increasingly important role in capturing and modeling biological knowledge. Semantic systems biology can complement the bottom-up approach with data-driven generation of hypotheses. Therefore, Semantic Systems Biology (SSB) is a systems biology approach that uses semantic description of knowledge about biological systems to facilitate integrated data analysis.

Welcome to the biology portal. Biology, from the Greek words bios (life) and the suffix -ology, meaning study of, is a branch of science. It is concerned with the characteristics and behaviors of organisms, how species and individuals come into existence, and the interactions they have with each other and with their environment. Biology encompasses a broad spectrum of academic fields that are often viewed as independent disciplines. Together, they study life over a wide range of scales.

PLoS Computational Biology is a peer-reviewed, open-access journal featuring works of exceptional significance that further our understanding of living systems at all scales through the application of computational methods. It is the official journal of the International Society for Computational Biology.

there is a different way of thinking about this problem that takes advantage of exciting new developments in molecular biology, evolutionary developmental biology, morphology, neurobiology, and linguistics. In a nutshell, for the first time we have a science that enables us to understand the actual, the possible and the unimaginable, a landscape that will forever change our understanding of what it means to be human, including how we arrived at our current point in evolutionary theory, and where might end up in ten or ten million years.

The NeuroCommons project seeks to make all scientific research materials - research articles, annotations, data, physical materials - as available and as useable as they can be. We do this by both fostering practices that render information in a form that promotes uniform access by computational agents - sometimes called "interoperability". We want knowledge sources to combine meaningfully, enabling semantically precise queries that span multiple information sources. Our work covers general data and knowledge sources used in computational biology as well as sources specific to neuroscience and neuromedicine. The practices that we develop and promote are designed to play well on the Semantic Web. We view our technical work not as creating a new service or content library, although we do both, but rather as helping to promote the growth of semantically linked scientific information.

The Systems Biology Markup Language (SBML) is a computer-readable format for representing models of biochemical reaction networks in software. It's applicable to models of metabolism, cell-signaling, and many others. SBML has been evolving since mid-2000 thanks to an international community of software developers and users. This website is the portal for the global SBML development effort; here you can find information about all aspects of SBML.

Bio-Pedia is an openfree bioinfomation encyclopedia. You can freely add words and modify them anytime. We are making a biology specific openfree encyclopedia for the world.

Systems Biology Linker (Sybil) is a platform for the integration of BioPAX and SBML. It is part of the Virtual Cell but also a useful tool for any SBML and BioPAX integration, in other words for any one who wants to use BioPAX with an SBML-capable platform or vice versa. While Sybil can be used as an intelligent conversion tool between SBML and BioPAX, it is primarily intended for building a joint repository for SBML and BioPAX data, where links between SBML elements and BioPAX objects are maintained by SBPAX. Sybil uses SYBREAM for most of the intelligent work involved in building the SBML-SBPAX-BioPAX joint repository.

OpenWetWare is an effort to promote the sharing of information, know-how, and wisdom among researchers and groups who are working in biology & biological engineering.

The exponential growth of diverse types of biological data presents the research community with an unprecedented challenge and opportunity. The challenge is to stay afloat in the flood of biological data, keeping it as accessible, up-to-date, and integrated as possible. The opportunity is to cultivate new models of data curation and exchange that take advantage of direct participation by a greater portion of the community.

Bringing Wisdom to Emerging Technology We are at an amazing and critical juncture in human history. If we continue on our current path, we face many potential disasters: overpopulation, shortages of water, oil, and raw materials, financial instability, disease, terrorism, war, and the destruction of species and ecosystems (eg. see Jeffrey Sachs "Common Wealth: Economics for a Crowded Planet"). But the next few decades will also bring advances in science and technology which may dramatically improve our lives. It is remarkable that we are simultaneously on the verge of major revolutions in biology, neuroscience, psychology, artificial intelligence, nanotechnology, and fundamental physics.

For my colleagues in wildlife biology and ecology ... The Ecology Plexus For my colleagues concerned with the nature of knowledge and their apostolic science ... The Knowledge Plexus And for friends who ponder the nature of nature ... The Arts Plexus

StemBook is a comprehensive, open-access collection of original, peer-reviewed chapters covering topics related to Stem Cell Biology

So, when it comes to terrorism, it only works because of technology, because a small number of people, almost always men, can use technology for leverage. Nineteen terrorists armed with sticks and stones could do very little to affect the United States of America. But 19 terrorists armed with jet fuel-laden aircraft ... The technology pushed their destructive capability way beyond where it would have been. Nineteen men against 300 million people. We would have never known they existed if they hadn't leveraged technology.

IkeWiki is a new kind of Wiki (a Semantic Wiki ) developed by SalzburgResearch that allows users to annotate pages and links between pages with semantic annotations. Such annotations are useful because they give machines a certain amount of "understanding" of the content that goes beyond merely displaying the page. This information can then e.g. be used for context-specific presentation of pages, advanced querying, consistency verification or drawing conclusions. Currently, IkeWiki can make use of some of the knowledge represented in RDFS and OWL schemas to display enhanced navigation tools. Furthermore, we implemented a sample "biology ontology" that automatically displays a taxonomy box for biological objects. Although IkeWiki looks and behaves like Wikipedia/MediaWiki in many aspects, it is a complete rewrite, and the system design significantly differs from other Wikis. IkeWiki makes full use of Semantic Web technologies like RDF(S) and OWL using the Jena RDF store, and is implemented as an AJAX-based Rich Internet Application, based on the Dojo Toolkit

'"A Science of Non-Classical Dynamics Based on the Progressive Evolution of the Larger Whole" In this paper, I am trying to lay out a new form of computation, which focuses on the harmony reached in a system. This type of computation in some way resembles certain recent results in chaos theory and complexity theory. However, the orientation of harmony-seeking computation is toward a kind of computation which finds harmonious configurations, and so helps to create things, above all, in real world situations: buildings, towns, agriculture, and ecology. I try to show that this way of thinking about computation is closer to intuition and personal feeling than the processes we typically describe as "computations." It is also more useful, potentially, in a great variety of tasks we face in building and taking care of the surface of the Earth, and quite different in character since it is value-oriented, not value-free. Examples are taken from art, architecture, biology, physics, astrophysics, drawing, crystallography, meteorology, dynamics of living systems, and ecology'

A sixty-six page think piece

Knowledge has generally existed within strict disciplinary boundaries, creating barriers against the free flow of information. The boundaries between disciplines reduces the ability of researchers to fully assess the work that has been accomplished and can lead to redundancy and to situations in which scholars are "reinventing the wheel" when they could instead be advancing knowledge into new frontiers. Is there a solution? There is if we take the time to create a cross-disciplinary understanding of knowledge representation and organization. The solution would require a comprehensive, interdisciplinary effort from scholars in diverse disciplines including communications, sociology, anthropology, information science, biology, computer science and philosophy. The Structure for Encompassing Extensible Knowledge (SEEK) is a model I propose to explore the possibilities for knowledge integration theoretically, technologically and from the perspective of human management.

The OBO Foundry is a collaborative experiment involving developers of science-based ontologies who are establishing a set of principles for ontology development with the goal of creating a suite of orthogonal interoperable reference ontologies in the biomedical domain. The groups developing ontologies who have expressed an interest in this goal are listed below, followed by other relevant efforts in this domain.

WikiProteins enables community annotation in a Wiki-based system. Extracts of major data sources have been fused into an editable environment that links out to the original sources. Data from community edits create automatic copies of the original data. Semantic technology captures concepts co-occurring in one sentence and thus potential factual statements. In addition, indirect associations between concepts have been calculated. We call on a 'million minds' to annotate a 'million concepts' and to collect facts from the literature with the reward of collaborative knowledge discovery. The system is available for beta testing at http://www.wikiprofessional.org