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Janos Haits

AskMe - Experiment Publisher - 0 views

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    AskMe - Experiment Publisher is a simple to use software package for users to publish their large scale life science experiment data on to the web by use of data mining and visualization concepts. With use of AskMe, scientists can share these datasets easily with their collaborators or they can be made publicly accessible to the scientific community by Sciencenet - our distributed peer to peer search and share engine.
Janos Haits

SCinet - Wikipedia, the free encyclopedia - 0 views

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    "SCinet is a high-performance network that is built, once a year, in support of the annual International Conference for High Performance Computing and Communications also known as the Supercomputing Conference. It is the primary network for the conference and is used by attendees to demonstrate and test high-performance distributed applications."
Janos Haits

LarKC: the Large Knowledge Collider - 0 views

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    The aim of the EU FP 7 Large-Scale Integrating Project LarKC is to develop the Large Knowledge Collider (LarKC, for short, pronounced "lark"), a platform for massive distributed incomplete reasoning that will remove the scalability barriers of currently existing reasoning systems for the Semantic Web.
Janos Haits

YaCy 'sciencenet': About - 0 views

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    "Sciencenet - Towards a global search and share engine for all scientific knowledge Modern biological experiments create vast amounts of data which are geographically distributed. These datasets consist of petabytes of raw data and billions of documents. Yet to the best of our knowledge, a search engine technology that searches and crosslinks all different data types in life sciences does not exist."
Janos Haits

British National Bibliography - 0 views

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    The British National Bibliography (BNB) lists the books and new journal titles published or distributed in the United Kingdom and Ireland since 1950. It also lists forthcoming book titles and hand-held electronic publications e.g. CD-ROMs, deposited with the Legal Deposit Office since 2003.
Janos Haits

Classroom for GitHub - 0 views

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    "Classroom for GitHub automates repository creation and access control, making it easy to distribute starter code and collect assignments on GitHub."
Skeptical Debunker

Tally of Antarctic Sealife Sheds Light on Changing Climate - 0 views

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    More than 6,000 different species living on the sea-floor have been identified so far and more than half of these are unique to the icy continent. A combination of long-term monitoring studies, newly gathered information on the marine life distribution and global ocean warming models, enable the scientists to identify Antarctica's marine "biodiversity hotspots". Researcher Griffiths describes how krill populations (the shrimp-like invertebrates eaten by penguins, whales and seals) are reducing as a result of a decrease in sea-ice cover. A much smaller crustacean (copepods) is dominating the area once occupied by them. This shifts the balance of the food web to favour predators, like jellyfish, that are not eaten by penguins and other Southern Ocean higher predators. Sea-ice reduction is also affecting penguins that breed on the ice.
Skeptical Debunker

Human cells exhibit foraging behavior like amoebae and bacteria - 0 views

  • "As far as we can tell, this is the first time this type of behavior has been reported in cells that are part of a larger organism," says Peter T. Cummings, John R. Hall Professor of Chemical Engineering, who directed the study that is described in the March 10 issue of the Public Library of Science journal PLoS ONE. The discovery was the unanticipated result of a study the Cummings group conducted to test the hypothesis that the freedom with which different cancer cells move - a concept called motility - could be correlated with their aggressiveness: That is, the faster a given type of cancer cell can move through the body the more aggressive it is. "Our results refute that hypothesis—the correlation between motility and aggressiveness that we found among three different types of cancer cells was very weak," Cummings says. "In the process, however, we began noticing that the cell movements were unexpectedly complicated." Then the researchers' interest was piqued by a paper that appeared in the February 2008 issue of the journal Nature titled, "Scaling laws of marine predator search behaviour." The paper contained an analysis of the movements of a variety of radio-tagged marine predators, including sharks, sea turtles and penguins. The authors found that the predators used a foraging strategy very close to a specialized random walk pattern, called a Lévy walk, an optimal method for searching complex landscapes. At the end of the paper's abstract they wrote, "...Lévy-like behaviour seems to be widespread among diverse organisms, from microbes to humans, as a 'rule' that evolved in response to patchy resource distributions." This gave Cummings and his colleagues a new perspective on the cell movements that they were observing in the microscope. They adopted the basic assumption that when mammalian cells migrate they face problems, such as efficiently finding randomly distributed targets like nutrients and growth factors, that are analogous to those faced by single-celled organisms foraging for food. With this perspective in mind, Alka Potdar, now a post-doctoral fellow at Case Western Reserve University and the Cleveland Clinic, cultured cells from three human mammary epithelial cell lines on two-dimensional plastic plates and tracked the cell motions for two-hour periods in a "random migration" environment free of any directional chemical signals. Epithelial cells are found throughout the body lining organs and covering external surfaces. They move relatively slowly, at about a micron per minute which corresponds to two thousandths of an inch per hour. When Potdar carefully analyzed these cell movements, she found that they all followed the same pattern. However, it was not the Lévy walk that they expected, but a closely related search pattern called a bimodal correlated random walk (BCRW). This is a two-phase movement: a run phase in which the cell travels primarily in one direction and a re-orientation phase in which it stays in place and reorganizes itself internally to move in a new direction. In subsequent studies, currently in press, the researchers have found that several other cell types (social amoeba, neutrophils, fibrosarcoma) also follow the same pattern in random migration conditions. They have also found that the cells continue to follow this same basic pattern when a directional chemical signal is added, but the length of their runs are varied and the range of directions they follow are narrowed giving them a net movement in the direction indicated by the signal.
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    When cells move about in the body, they follow a complex pattern similar to that which amoebae and bacteria use when searching for food, a team of Vanderbilt researchers have found. The discovery has a practical value for drug development: Incorporating this basic behavior into computer simulations of biological processes that involve cell migration, such as embryo development, bone remodeling, wound healing, infection and tumor growth, should improve the accuracy with which these models can predict the effectiveness of untested therapies for related disorders, the researchers say.
thinkahol *

Brain is organized like the Internet: USC neuroscientists | KurzweilAI - 1 views

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    A study by USC scientists of the brain connections in a small area of the rat brain showed them as patterns of circular loops, suggesting that at least in this part of the rat brain, the wiring diagram looks like a distributed network, rather than a hierarchy, the traditional view.
thinkahol *

Fruit fly nervous system provides new solution to fundamental computer network problem ... - 0 views

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    The fruit fly has evolved a method for arranging the tiny, hair-like structures it uses to feel and hear the world that's so efficient a team of scientists in Israel and at Carnegie Mellon University says it could be used to more effectively deploy wireless sensor networks and other distributed computing applications.
thinkahol *

YouTube - Sam Harris SALT - 2 views

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    December 9th, 02005 - Sam Harris"The View From The End Of The World"This is an audio only presentation. This talk took place in the Conference Center Golden Gate Room, San Francisco. Quote: With gentle demeanor and tight argument, Sam Harris carried an overflow audience into the core of one of the crucial issues of our time: What makes some religions lethal? How do they employ aggressive irrationality to justify threatening and controlling non-believers as well as believers? What should be our response? Harris began with Christianity. In the US, Christians use irrational arguments about a soul in the 150 cells of a 3-day old human embryo to block stem cell research that might alleviate the suffering of millions. In Africa, Catholic doctrine uses tortured logic to actively discourage the use of condoms in countries ravaged by AIDS. "This is genocidal stupidity," Harris said. Faith trumps rational argument. Common-sense ethical intuition is blinded by religious metaphysics. In the US, 22% of the population are CERTAIN that Jesus is coming back in the next 50 years, and another 22% think that it's likely. The good news of Christ's return, though, can only occur following desperately bad news. Mushroom clouds would be welcomed. "End time thinking," Harris said, "is fundamentally hostile to creating a sustainable future." Harris was particularly critical of religious moderates who give cover to the fundamentalists by not challenging them. The moderates say that all is justified because religion gives people meaning in their life. "But what would they say to a guy who believes there's a diamond the size of a refrigerator buried in his backyard? The guy digs out there every Sunday with his family, cherishing the meaningthe quest gives them." "I've read the books," Harris said. "God is not a moderate." The Bible gives strict instructions to kill various kinds of sinners, and their relatives, and on occasion their entire towns. Yet slavery is challenged nowhere in the New or
thinkahol *

Dr. Daniel G. Nocera - YouTube - 0 views

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    The supply of secure, clean, sustainable energy is arguably the most important scientific and technical challenge facing humanity in the 21st century. Rising living standards of a growing world population will cause global energy consumption to double by mid-century and triple by the end of the century. Even in light of unprecedented conservation, the additional energy needed is simply not attainable from long discussed sources these include nuclear, biomass, wind, geothermal and hydroelectric. The global appetite for energy is simply too much. Petroleum-based fuel sources (i.e., coal, oil and gas) could be increased. However, deleterious consequences resulting from external drivers of economy, the environment, and global security dictate that this energy need be met by renewable and sustainable sources. The dramatic increase in global energy need is driven by 3 billion low-energy users in the non-legacy world and by 3 billion people yet to inhabit the planet over the next half century. The capture and storage of solar energy at the individual level personalized solar energy drives inextricably towards the heart of this energy challenge by addressing the triumvirate of secure, carbon neutral and plentiful energy. This talk will place the scale of the global energy issue in perspective and then discuss how personalized energy (especially for the non-legacy world) can provide a path to a solution to the global energy challenge. Daniel G. Nocera is the Henry Dreyfus Professor of Energy at the Massachusetts Institute of Technology, Director of the Solar Revolutions Project and Director of the Eni Solar Frontiers Center at MIT. His group pioneered studies of the basic mechanisms of energy conversion in biology and chemistry. He has recently accomplished a solar fuels process that captures many of the elements of photosynthesis outside of the leaf. This discovery sets the stage for a storage mechanism for the large scale, distributed, deployment of solar energy. He has b
Janos Haits

http://beta.map-of-life.appspot.com/ - 0 views

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    The current release allows you to explore globally the geographic distributions for any terrestrial vertebrate species.
Janos Haits

Sciencenet - Distributed Scientific Search and Publishing Engine - 1 views

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    Towards a global search and share engine for all scientific knowledge
Janos Haits

ΛLΞXΛNDRIΛ - The People's Library - 0 views

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    "The Decentralized Library of Alexandria is an open-source standard in active development to allow users to publish and distribute original content themselves, from music to videos to feature films, 3d printable inventions, recipes, books and just about anything else. It is a unified, ever-growing library of art, history and culture which users interact with through a variety of front end apps. A native browser is in continuing development, but the Alexandria standard can also be used by other open source developers and even current industry incumbents like YouTube, Soundcloud, iTunes and Netflix to offer a far superior value proposition to content providers and a better experience for users than currently available."
David Haow

Evaluation of Potential Ecological Risk and Contamination Assessment of Heavy Metals in... - 0 views

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    The contamination and potential ecological risk posed by heavy metals from thirteen (13) sediment samples from different sampling sites along the lower portion of Agusan River were analyzed and assessed using different pollution indices. The results obtained shows that the total digest concentrations of different heavy metals under investigation have the following order: Cd < Pb < Zn < Mn, for both first sampling periods. The speciation and distribution pattern have shown that significant amounts of all metals are present in the residual fraction. Similarly, oxide-bound and organic-bound fractions were found to be highly important for Zn and Mn while Cd and Pb were significantly associated in the residual and exchangeable fractions. The results of different pollution indices moreover, showed that among all the heavy metals being studied, Cd posed the highest environmental risk across all sampling stations in both sampling periods and Mn metal was highly enriched and abundant in all of the sampling stations. Importantly, PCA results suggest that Zn, Mn and Pb may have the same origin while Cd might be coming from different sources, and this is corroborated well with the cluster analysis results. The results obtained from this work provide baseline data on the assessment of heavy metal pollution in the lower portion of Agusan River. Importantly, the acquired environmental indices will certainly help safety managers in assessing and interpreting the potential risk of the sediment associated chemical status that might adversely affect aquatic organisms in the selected sampling sites.
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