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Jérôme OLLIER

Microbiomes of Healthy and Bleached Corals During a 2016 Thermal Bleaching Event in the... - 0 views

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    As seawater temperature rises, repeated thermal bleaching events have negatively affected the reefs of the Andaman Sea for over decades. Studies on the coral-associated microbial diversity of prokaryotes and microbial eukaryotes (microbiome) in healthy and bleached corals are important to better understand the coral holobionts that involved augmented resistance to stresses, and this information remains limited in the Andaman Sea of Thailand. The present study thereby described the microbiomes of healthy (unbleached) and bleached colonies of four prevalent corals, Acropora humilis, Platygyra sp., Pocillopora damicornis, and Porites lutea, along with the surrounding seawater and sediments, that were collected during a 2016 thermal bleaching event, using 16S and 18S rRNA genes next-generation sequencing (NGS). Both prokaryotic and eukaryotic microbes showed isolated community profiles among sample types (corals, sediment, and seawater) [analysis of similarities (ANOSIM): p = 0.038 for prokaryotes, p < 0.001 for microbial eukaryotes] and among coral genera (ANOSIM: p < 0.001 for prokaryotes and microbial eukaryotes). In bleached state corals, we found differences in microbial compositions from the healthy state corals. Prevalent differences shared among bleached coral genera (shared in at least three coral genera) included a loss of reported coral-beneficial microbes, such as Pseudomonadales, Alteromonadales, and Symbiodinium; meanwhile an increase of putative coral-pathogenic Malassezia and Aspergillus. This difference could affect carbon and nitrogen availability for coral growth, reflective of a healthy or bleached state. Our findings in part supported previously microbial dysbiosis knowledge of thermal bleaching coral microbiomes around South East Asia marine geography, and together ongoing efforts are to support the understanding and management of microbial diversity to reduce the negative impacts to corals in massive thermal bleaching events.
Jérôme OLLIER

Via @MBSociety - Reviews and syntheses: Trends in primary production in the Bay of Ben... - 0 views

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    Ocean primary production is the basis of the marine food web, sustaining life in the ocean via photosynthesis, and removing carbon dioxide from the atmosphere. Recently, a small but significant decrease in global marine primary production has been reported based on ocean color data, which was mostly ascribed to decreases in primary production in the northern Indian Ocean, particularly in the Bay of Bengal. Available reports on primary production from the Bay of Bengal (BoB) are limited, and due to their spatial and temporal variability difficult to interpret. Primary production in the BoB has historically been described to be driven by diatom and chlorophyte clades, while only more recent datasets also show an abundance of smaller cyanobacterial primary producers visually difficult to detect. The different character of the available datasets, i.e., direct counts, metagenomic and biogeochemical data, and satellite-based ocean color observations, make it difficult to derive a consistent pattern. However, making use of the most highly resolved dataset based on satellite imaging, a shift in community composition of primary producers is visible in the BoB over the last 2 decades. This shift is driven by a decrease in chlorophyte abundance and a coinciding increase in cyanobacterial abundance, despite stable concentrations of total chlorophyll. A similar but somewhat weaker trend is visible in the Arabian Sea, where satellite imaging points towards decreasing abundances of chlorophytes in the north and increasing abundances of cyanobacteria in the eastern parts. Statistical analysis indicated a correlation of this community change in the BoB to decreasing nitrate concentrations, which may provide an explanation for both the decrease in eukaryotic nitrate-dependent primary producers and the increase in small unicellular cyanobacteria related to Prochlorococcus, which have a comparably higher affinity to nitrate. Changes in community composition of primary producers and an
Jérôme OLLIER

Via @WhySharksMatter - Distinct coral reef habitat communities characterized by environ... - 0 views

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    Coral reefs are biodiversity hotspots, places of high endemicity and provide essential services to billions of people globally. With increasing threats to these reefs worldwide, there is a need to implement faster, more efficient ways to monitor spatial and temporal patterns of biodiversity. Environmental DNA (eDNA) metabarcoding offers a promising tool to address this issue, as it has revolutionized our ability to monitor biodiversity from complex environmental samples such as seawater. However, the capacity for eDNA to resolve fine scale shifts in community composition across habitats in seascapes is yet to be fully explored. Here, we applied eDNA metabarcoding using the rRNA 18S Universal eukaryote assay to explore differences in community profiles between samples collected from the lagoon and reef slope habitats across more than 170 km of the Ningaloo Coast World Heritage Area in Western Australia. We recovered 2061 amplicon sequence variants that comprised of 401 taxa spanning 14 different metazoan phyla such as cnidarians, poriferans, molluscs, algae, worms, and echinoderms. Our results revealed strong clustering of samples by habitat type across the length of the reef. Community dissimilarity (beta diversity) between samples collected from the reef slope and lagoon habitats was high and was driven largely by a strong rate of spatial turnover, indicating a distinct set of taxa representing each reef zone community. We also detected a strong pattern of isolation by distance within our slope samples, suggesting that communities are spatially stratified across the length of the reef. Despite high connectivity due to regular flushing of the lagoon environment, our results demonstrate that metabarcoding of seawater eDNA from different habitats can resolve fine scale community structure. By generating multi-trophic biodiversity data, our study also provided baseline data for Ningaloo from which future changes can be assessed.
Jérôme OLLIER

Changes in size-dependent Chlorophyll a concentration and group-specific picophytoplank... - 0 views

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    To clarify the changes in phytoplankton community and influencing factors in short-term nutrient-addition experiments in the Equatorial Eastern Indian Ocean, we conducted three experiments (one in situ-like experiment, one on-deck experiment with deep seawater, and one on-deck experiment with surface seawater). Our findings indicate that when nutrients were added, there was a more significant increase in the chlorophyll a (chl a) concentrations of microphytoplankton (>20 μm) compared to those of nanophytoplankton (2-20 μm) and picophytoplankton (<20 μm phytoplankton. Furthermore, bottle effects should be considered when conducting incubation experiments.
Jérôme OLLIER

Study finds juvenile dolphins who play together are more successful as adults - @Bristo... - 0 views

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    Juvenile social play predicts adult reproductive success in male bottlenose dolphins, a new study has found.
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