Group items tagged

X-Spin Viral RNA Extraction Kit provides a fast an easy isolation method for the extraction and purification of nucleic acid (RNA) in samples. We are top RNA extraction kit manufacturer and offer viral rna extraction kits or rna Isolation kit covering many sample types and throughput needs.

Origins of Life Abiogenesis article in Wikipedia. The Origin of Life - Abiogenesis, a youtube video produced by Chuck Kopec.  A Simpler Origin for Life, an article by Robert Shapiro in Scientific American. The Miller-Urey Experiment article in Wikipedia. RNA and the RNA World Exploring the New RNA World, an essay by Thomas Cech published on the Nobel Prize website. RNA Video Clips from the HHMI website that include demonstrations of catalysis and interviews with Thomas Cech. A World Apart, an HHMI article about RNA World reseearch and the role of RNAs in medicine.  RNA World article in Wikipedia. Protocells The Emergence of Cells During the Origin of Life, an essay by Irene Chen published in Science.  What Came Before DNA? an article published in Discover featuring Jack Szostak and Steven Benner.  The Szostak Lab Astrobiology The National Astrobiology Institute, established by NASA to study life in the universe.  The SETI Institute, studying the origins, nature and prevalence of life in the universe.  Astrobiology: The Search for Life, a website hosted by the Exploratorium.

Researchers have now created the first molecules of RNA, DNA's singled-stranded relative, that are capable of copying almost any other RNAs. The discovery bolsters the widely held view among researchers who study the origin of life that RNA likely preceded DNA as the central genetic storehouse of information in the earliest cells some 4 billion years ago.

Nature's best kept secret is a wonder molecule called RNA. It is central to the origin of life, evolution, and the cellular machinery that keeps us alive. In this Lab you'll play the role of a molecular engineer by solving RNA folding puzzles. Then take your skills to Eterna, where you can design RNAs that could be at the heart of future life-saving therapies.

de Villena and his colleagues counted the RNA molecules produced and found that genes from the father produced on average more RNA than genes from the mother. (And remember, RNA directs the production of proteins, which are the workhorses of the body's development and function.) The implication? "It's not only what you inherit, but from whom you inherit," he said.

Because the gene-enzyme system forms a closed loop, it presents us with a classic chicken or egg conundrum: Which came first, genes or the protein enzymes they code for? While the details are still not fully worked out, discoveries over the past few decades have lead researchers to a surprising possible solution: What really came first? Genes that act as enzymes! The RNA World Hypothesis is the idea that before living cells, the genetic code, and the gene/protein cycle ever existed, chains of a chemical called RNA were forming naturally. Once formed, some of these chains were able to function as enzymes, and were even able to evolve by making copies of themselves with slight, accidental modifications.

3:09 video RNA may have been the origin of life on Earth. Go on a whirlwind tour of RNA's evolving role through billions of years of evolutionary history. Play the RNA Lab: http://www.pbs.org/wgbh/nova/labs/lab...

At least 140 alternative RNA nucleotide forms exist. On mRNA, the most common is the methylation of adenosine on the N6 position (m6A).

3:00 video Transcription is a vital process in biological lifeforms. It is through this process that the biological roadmap encoded in a strand of DNA is used to produce a complementary RNA copy. The RNA can then go on to help produce the proteins and enzymes that power living organisms.

Your cells contain an amazing factory that builds the RNA and protein machines that keep you alive. Learn how this factory works and what the relationship is between DNA, RNA, and proteins.

28 min video on DNA, RNA, protein

The most recent human retroviral infections leading to germ line integration took place with a subgroup of human endogenous retroviruses called HERVK(HML-2). The human genome contains ~90 copies of these viral genomes, which might have infected human ancestors as recently as 200,000 years ago. HERVs do not produce infectious virus: not only is the viral genome silenced - no mRNAs are produced - but they are littered with lethal mutations that have accumulated over time. A recent study revealed that HERVK mRNAs are produced during normal human embryogenesis. Viral RNAs were detected beginning at the 8-cell stage, through epiblast cells in preimplantation embryos, until formation of embryonic stem cells (illustrated). At this point the production of HERVK mRNA ceases. Viral capsid protein was detected in blastocysts, and electron microscopy revealed the presence of virus-like particles similar to those found in reconstructed HERVK particles. These results indicate that retroviral proteins and particles are present during human development, up until implantation.

The possibilities of pseudo-peptide-DNA mimics like PNA (peptide nucleic acid) having a role for the prebiotic origin of life prior to an RNA world is discussed on the basis of literature data showing that this type of molecules might have formed on the primitive earth (or other places in the universe), as well as data indicating the possibilities of template-directed PNA chemical replication and ligation. In particular, the merits of an achiral prebiotic genetic material is discussed.

Current CRISPR-based screens often mutate the beginning of a gene, which sometimes results in the expression of a functional protein variant. To circumvent this problem, researchers at Cold Spring Harbor Laboratory (CSHL) designed CRISPR guide RNAs that would mutate the portion of a gene encoding a domain on the surface of the protein where a small molecule could bind to alter the protein's function. The team had previously identified such a binding pocket on the protein BRD4, and a small molecule inhibitor that binds in the pocket is an effective leukemia treatment.

3 minute video

The origin of viruses remains mysterious because of their diverse and patchy molecular and functional makeup. Although numerous hypotheses have attempted to explain viral origins, none is backed by substantive data. We take full advantage of the wealth of available protein structural and functional data to explore the evolution of the proteomic makeup of thousands of cells and viruses. Despite the extremely reduced nature of viral proteomes, we established an ancient origin of the "viral supergroup" and the existence of widespread episodes of horizontal transfer of genetic information. Viruses harboring different replicon types and infecting distantly related hosts shared many metabolic and informational protein structural domains of ancient origin that were also widespread in cellular proteomes. Phylogenomic analysis uncovered a universal tree of life and revealed that modern viruses reduced from multiple ancient cells that harbored segmented RNA genomes and coexisted with the ancestors of modern cells. The model for the origin and evolution of viruses and cells is backed by strong genomic and structural evidence and can be reconciled with existing models of viral evolution if one considers viruses to have originated from ancient cells and not from modern counterparts.

Origins of life with self-replicating molecules

webpage tutorials with check for understanding

article addresses student question, "Why do cells use uracil, when thymine is already available?"

14 minute video using hot pocket analogy for the central dogma