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Humans are largely omnivores, and meat has featured in the diets of most cultures. However, with the increasing population and pressure on the environment, traditional methods of meeting this fundamental food requirement are likely to fall short. Now, researchers at the University of Tokyo report innovative biofabrication of bovine muscle tissue in the laboratory that may help meet escalating future demands for dietary meat.

But when cognitive science turned its back on behaviourism more than 50 years ago and began dealing with signals and internal maps, goals and expectations, beliefs and desires, biologists were torn. All right, they conceded, people and some animals have minds; their brains are physical minds - not mysterious dualistic minds - processing information and guiding purposeful behaviour; animals without brains, such as sea squirts, don't have minds, nor do plants or fungi or microbes. They resisted introducing intentional idioms into their theoretical work, except as useful metaphors when teaching or explaining to lay audiences. Genes weren't really selfish, antibodies weren't really seeking, cells weren't really figuring out where they were. These little biological mechanisms weren't really agents with agendas, even though thinking of them as if they were often led to insights.

In the flagship article, The ENCODE Project Consortium et al.5 provide a bird's-eye view of the updated encyclopedia, which contains newly added data sets from 6,000 experiments, performed on around 1,300 samples. By integrating these data sets, the consortium has created an online registry of candidate CREs. Most are classified as promoters or enhancers - CREs respectively located at or some distance from the genomic site at which transcription of a gene begins. The consortium tracked the activity of each candidate CRE, along with the proteins that bind to it in many different samples from various tissues. They used chromatin-looping data to link enhancers to genes that they might regulate. This online registry marks a true milestone, turning an overwhelming amount of genomic information into a searchable, filterable and retrievable encyclopedia of DNA elements, which is freely accessible at https://screen.encodeproject.org.

Using two independent single-cell approaches, we identified a shift in the overall immune cell composition in cavefish as the underlying cellular mechanism, indicating strong differences in the immune investment strategy. While surface fish invest evenly into the innate and adaptive immune systems, cavefish shifted immune investment to the adaptive immune system, and here, mainly towards specific T-cell populations that promote homeostasis. Additionally, inflammatory responses and immunopathological phenotypes in visceral adipose tissue are drastically reduced in cavefish. Our data indicate that long-term adaptation to low parasite diversity coincides with a more sensitive immune system in cavefish, which is accompanied by a reduction in the immune cells that play a role in mediating the pro-inflammatory response.

Silicon is the second-most abundant element in Earth's crust and it plays a vital role in plant life, both on land and in the sea. Silicon is used by plants in tissue building, which helps to ward off herbivorous animals. In the ocean, phytoplankton consume enormous amounts of silicon; they get a constant supply courtesy of rivers and streams. And silicon winds up in rivers and streams due to erosion of silicon-containing rocks. Land plants also use silicon. They get it from the soil. In this new effort, the researchers began by noting that the terrestrial biogeochemical cycling of silicon (how it moves from plants back to the soil and then into plants again) is poorly understood. To gain a better understanding of how it works, they ventured to a part of Western Australia that, unlike other parts of the world, has not been impacted by Pleistocene glaciations. The soil there gave the researchers a look at the silicon cycle going back 2 million years.