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“Many of the prisoners were already very angry after the coup and eager to fight,” said Yasser Khalil, an Egyptian journalist who has extensively covered prisons. “Telling them them they will go to heaven and get virgins just makes it that much more attractive. They say, ‘Yes, you have a Christian neighbor and he is lovely. But the Coptic Church supports the state, and thus they should be killed.’”

Reports have emerged of ISIS recruiters being locked up in prisons all the way from Algeria to Russia’s Caucasus region, Tajikistan, and Indonesia.

many warn that ISIS’s nihilism is overpowering the Brotherhood’s appeals. “This is the year of disappointment and disillusion when there’s no hope for the Islamist factions to get out of prison any time soon,”

Refusing legal counsel is one trait that distinguishes ISIS prisoners from other inmates, including alleged al-Qaeda supporters. “He used to love life. He used to be keen on getting out of jail. But not anymore.”

“ISIS says, ‘We tried democracy and we ended up in jail,’” Abdullah recalled. “‘It was the army that introduced the gun. Why is Sisi in power? He has guns.’”

“His mission was to get closer to the poor and the simple people and convince them that if they joined the Islamic State they would have power, money, and women,” he said, “and heaven in the afterlife.”

Ahmed Abdullah, the liberal activist, had had enough. He approached some wealthy businessmen inside the prison and arranged for them to bribe guards to allow in some books. He launched a reading group using Arabic translations of world literature and philosophy. They read Franz Kafka to understand the nightmarish nature of Egypt’s bureaucracy, George Orwell as an illustration of brutal authoritarianism, and Jean-Jacques Rousseau as an introduction to democratic governance and the social contract. To his delight the other prisoners were receptive; even some of the Islamists would attend the talks.Suddenly, security forces stormed in and seized the books, loudly accusing Abdullah, who is a professor of engineering at a university in Cairo, of poisoning the minds of the inmates. He was transferred to a dank solitary confinement cell, without a towel or blanket. After three days he was released from jail. He said authorities must have calculated he was more trouble inside prison than outside.“When we have a chance to compete we win,” said Abdullah, smoking flavored shisha at a cafe in central Cairo. “The inmates were really excited with what we had to say. But it turns out our government considers secular activists more dangerous than the Muslim Brotherhood, or ISIS.”

Many of Egypt’s estimated 40,000 prisoners are being held in makeshift jailhouses, interior ministry compounds and military camps that don’t have the capacity for separating inmates. One former prisoner described watching as another inmate was recruited by an ISIS supporter while sitting for hours in the van on the way from jail to court. One researcher described a brawl involving Brotherhood and ISIS prisoners during a similar transfer of inmates earlier this year.

“ISIS looks down on the Muslim Brotherhood, they consider them infidels, and they point this out to the younger Muslim Brotherhood members,”

ISIS targets recruits who have special skills. Gamal Ziada recalled intense competition between the Muslim Brotherhood and ISIS over a prisoner who was a student at Cairo’s elite Zewail City of Science and Technology, considered Egypt’s MIT. “ISIS told him, ‘You’re not going to carry a weapon,’” Gamal Ziada said. “‘You’re not going to fight. You will use your brain.’”

“He tried to convince me that I was an apostate and that my parents were apostates too, and I have to convince my family to give up the pleasures of the world and return to Allah,” the smuggler said of his 2015 imprisonment. “He used to ask me to share lunch and dinner with him. He was ordering the best Turkish food in town. He was very rich. He told me that I could continue my work in smuggling for the Islamic State and make much more profit than I did with working with refugees.”

“Imagine you are in prison — the great challenge is killing time,” said Ghadi, whose father and brother have been jailed. “Before you could read books. When they closed that door the only way to kill time is sharing your thoughts and experiences. The Islamist groups and factions are the great majority of prisoners. Imagine there’s a constant flow of radical ideas into your mind. They talk and listen and talk and listen. You start to give in. You get weak. You lose all rational argument. You are finally ready to absorb radical thoughts and arguments.”

Some experts fear ISIS has recruited potential sleeper agents in prison who might later become emboldened to act. Abdou, the researcher, said he interviewed one former inmate who joined ISIS in prison but dropped any Islamist pretenses the moment he walked out of jail, shaving his beard and going back to smoking shisha and lazing about with old friends.

ISIS recruitment and violence inside prisons jumped in 2015 when Egyptian authorities began clamping down on allowing books inside jails

He thinks that the slaughter in neighbouring Syria will lead to the overthrow of the Assad regime that back in the 1980s murdered his father, his friends and so many of his neighbours.

Muawiya is barely out of nappies and he would probably rather watch cartoons than Free Syrian Army propaganda. But his head is being filled daily with sectarian chauvinism and thoughts of war. As we interview his father, Muawiya starts firing an imaginary rifle made from a stick. He is very specific in his actions - it is an imaginary bolt-action sniper rifle

Out on the streets of Bab al-Tabbana we film other young boys playing war games. They take aim and shoot their toy rifles uphill towards Jabal Muhsin

Up on the Jabal, it is a mirror image. The kids point their plastic Kalashnikovs down the slope, as their fathers do in real life.

The young men who make up the militia on both sides look identical in their skinny jeans, knock-off Adidas weightlifter vests, baseball caps and Maori-style tattoos.

The town's radical reputation has lately been burnished by the presence of several former Guantanamo prisoners, including Sufyan bin Qumo, who heads the Ansar al-Shariah Islamist group blamed by the American for the U.S. embassy attack.

"In Libya it's only been a year and the idea of democracy and political parties is difficult for people to absorb. The people have not responded to this imported, packaged democracy. We don't accept it. We have a religion that needs to be taken into account," said Azouz, an English teacher who belongs to one of Derna's most prominent families.

For the Islamist groups, which are part of a Salafi movement whose members try to model their lives on the early followers of the Prophet Mohammad, the legitimacy of the newborn Libyan state is highly questionable."It's the revolution that made the state and some of the opportunists who did not participate in the revolution or shed any blood for the revolution are the ones who are forcing their orders on us," Azouz said.

"The solution is to draft an Islamic constitution ... and set up Sharia courts so that people can trust that this state is a true Islamic state,"

Some jihadists are already preparing for what they see is an inevitable showdown with those who seek to turn Libya into an "apostate" nation. They can see no compromise with an infidel West bent on changing Libya's Islamic identity.

The deep streak of radicalism in eastern Libya that fed on the neglect of towns such as Derna during the Gaddafi era is still strong these days. Many jihadists say the country's new rulers are favoring Tripoli just as the former dictator did.

the CIA estimates that there are around 30,000 Muslim jihadists in the entire world. A Kurdish leader has suggested that the CIA underestimates the jihadist threat, and claims that the total number is closer to 200,000. Even assuming the larger figure, jihadists represent a grand total of 0.01 percent of the world’s 1.8 billion Muslims

A 2011 Gallup poll found that American Muslims were the least likely of all polled American religious groups to accept vigilante violence against civilians. In all, 26 percent of American Protestants, 27 percent of Catholics, 22 percent of Jews, 19 percent of Mormons, 23 percent of atheists, but just 11 percent percent of Muslims said that it is “sometimes justified” for an “individual person or a small group of persons to target and kill civilians”.

Glaringly absent from American news media are opinion polls showing that Muslims are no more likely to accept violence than other groups. For instance, a 2011 Gallup World Violence poll showed that Muslims were just as likely as non-Muslims to reject vigilante acts of violence against civilians

Media scholar Jack Shaheen carried out a content analysis of more than 900 Hollywood movies featuring Arab or Muslim characters. Shaheen found Muslim characters are almost never cast in positive or neutral roles. The overwhelming majority of films that feature Arab or Muslim characters cast them as enemies, terrorists, violent, savage or backwards

compared to other threats of violence, Muslim terrorism garners exaggerated attention in American news and politics.

In the 14 years since 1 January, 2002, Muslim terrorists have killed 45 Americans in the United States, a smaller number than right-wing conservative terrorists have killed during the same time period. Also, since the start of 2002, there have been more than 200,000 firearm-related homicides in the United States

More realistic, proportionate presentations would greatly improve American political life. However, given the extent to which the Islamophobia industry is funded, people shouldn’t hold their breath waiting for fairer, less sensational presentations.

"What brought this ideology is the marginalization," says one resident. "If someone can't earn a living, he thinks the alternative is to be strict in worship."

Mubarak built up tourist resorts in South Sinai that locals say mostly benefited Egyptians from the Nile Valley, and tried to impose an Egyptian administrative structure on North Sinai which undermined the authority of local Bedouin tribal elders.

"They ran away in all directions and nobody knows where they went,"

In every village, three or four youths have disappeared to join the militants, sometimes inspired by al Qaeda propaganda over the Internet, and sometimes by preachers in local mosques.

North Sinai is in some ways similar to the tribal areas of Pakistan, where al Qaeda has dug deep roots. Both have been neglected by central government; both lie in the middle of wider political conflicts.And the authority of tribal leaders in both has been diminished as money - from crime, Gulf remittances and state patronage - filtered into other hands - making it easier for militants to promote unity in Islam over tribal loyalty.

the rise of these new Bedouin fundamentalists," said Yaari. "They are destroying the old tribal structures. They allow marriages between rival tribes and force women to wear the veil. This never happened before

Already, according to one Arab diplomat in Islamabad, Egyptian members of al Qaeda have begun to move back from Pakistan to take advantage of political changes at home.

"Al Qaeda is more interested in using Palestine as a tag for its global fight rather than have an actual base in Gaza or the West Bank," said one diplomat. "They believe a Palestinian group would have a more nationalist outlook."

The St. John’s library now hosts the largest digital collection of old manuscripts in the world, including 250,000 full books and 75 million individual handwritten pages.

Stewart thinks the Timbuktu manuscripts are his greatest prize. By preserving Islamic manuscripts, he believes he is being faithful to his Benedictine calling. Speaking to the NEA, Stewart comparing his work in Mali with Peter the Venerable, the 12th-century abbot who oversaw the translation of the Quran into Latin. “As medieval Christian scholars of Arabic manuscripts came to understand, their enemy was not Islam, however deep their theological differences,” he said. “The common enemy was—and remains—the fanaticism and ignorance that make understanding impossible.”