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emmarrogers

Biodegradation of polyethylene by the marine fungus Parengyodontium album - ScienceDirect - 1 views

www.sciencedirect.com/...S0048969724029668

HSR HSR-2025 behavior biology environmental potential research idea botany

shared by emmarrogers on 04 Jun 24 - No Cached
Sean Nash liked it
  • UV light
    • emmarrogers
      emmarrogers on 04 Jun 24
       
      If we were to use X or Gamma rays, would that speed up the process?
  • Graphical abstract
    • emmarrogers
      emmarrogers on 04 Jun 24
       
      Why does it need the 9 day incubation period? Could we lower that
    • emmarrogers
      emmarrogers on 04 Jun 24
       
      So, could we just do this with a plastic bottle?
  • degradation
  • ...2 more annotations...
  • Other important plastic types afloat in the sea are polypropylene (PP) and to a lesser degree polystyrene (PS) and polyethylene terephthalate (PET).
    • emmarrogers
      emmarrogers on 04 Jun 24
       
      Does/ Could this fungi degrade these as well
  • Zalerion maritimum (Paço et al., 2017), Alternaria alternata FB1 (Gao et al., 2022) and Rhodotorula mucilaginosa (Vaksmaa et al., 2023a), while Cladosporium halotolerans 6UPA1 was shown to degrade PUR (Zhang et al., 2022).
  • Sean Nash on 05 Jun 24
     
    Strange.... when I go to this article, I can see your highlights, but I cannot see your comments. Usually, when I can see those, I can comment back right there as opposed to saving it myself. Grrrr...
  • Sean Nash on 05 Jun 24
     
    Super interesting topic (I saw this one last week). The work with isotopes they did here is well beyond feasibility for us, but that doesn't mean there isn't something here that could be done. You'd have to work through the set up of marine environments (tanks) and acquisition of these fungal strains. I'm betting the one they recently recovered from biofilm on plastic trash in the ocean would be super difficult to get our hands on, but they do mention several others that have previously been found to degrade plastics. perhaps those are more easily obtained. (?) Degredation fo plastic by microbes is EXACTLY what the cheater-guy did in lasy year's winning ISEF project, but like this article says, most of this work has been done with bacteria, not eukaryotic organisms like fungi. I also thing the area of biofilms is super interesting. The analysis (beyond weighing the plastic pre/post) is rather instrumental and that might be difficult depending upon our ability to find someone to help us analyze instrumentally. I like the idea, but feasibility is unknown at the moment. You might want to keep reading down this area. It is certainly interesting and important. Keep an eye on feasibility as you go forward.
Sean Nash

A new study reveals that marine cyanobacteria communicate - 0 views

www.sciencedaily.com/...240606152330.htm

algae cyanobacteria communication marine oceans marinebiology nanotubules proteins HSR HSR-2025 science environmental botany questions biology

shared by Sean Nash on 07 Jun 24 - No Cached
  • Sean Nash on 07 Jun 24
     
    Adding this one less as feasible study inspiration, and more of... this is a huge finding about the most important organisms on the planet as a whole. The more we search, the more we find that organisms communicate. Cooperate even. Trees in a healthy forest communicate and cooperate. And now this. So cool...
Sean Nash

Mysterious Underwater Acoustic World of British Ponds Revealed in New Study | Current Science Daily - 0 views

currentsciencedaily.com/...sh-ponds-revealed-in-new-study

hydrophone sound survey pond potential research idea biology physics computer science environmental science HSR HSR-2023 HSR-2025

shared by Sean Nash on 11 Jun 24 - No Cached
  • The previously hidden and diverse underwater acoustic world in British ponds has been revealed by a team of researchers at the University of Bristol.
    • Sean Nash
      Sean Nash on 11 Jun 24
       
      So... my immediate thought is: How cool would it be to do this here? One thing we DO have: PONDS. See if this *sounds* interesting. Get it? ;)
  • Acoustic monitoring has been shown to effectively survey birds and monkeys in rainforests, and marine mammals in the oceans. However, freshwater environments have remained largely unexplored despite their diverse soundscapes.
    • Sean Nash
      Sean Nash on 11 Jun 24
       
      BOOM. Again, "relatively unexplored" is super exciting verbiage to me. Acoustics. Hydrophones. Is this feasible? Is the equipment affordable? If not, could we borrow one? Dig into it. What are the possibilities?
  • analysis of the audio files revealed clear daily acoustic activity cycles in each pond
    • Sean Nash
      Sean Nash on 11 Jun 24
       
      Aside from the exploratory surveys you would do just to see "what's out there" and assess what we CAN learn from listening to a pond, you could make it experimental by comparing ponds you've assessed the health of by other means. In other words, do acoustic comparisons between two ponds correlate with what you find by doing a macroinvertebrate sampling? I really LIKE the possibilities in this one!
  • ...3 more annotations...
  • Typically, a nocturnal chorus is made by aquatic insects that compete to attract mates by producing strange scratching sounds as they rub their genitals against their abdomens. During the daytime, however, aquatic plants dominate the underwater orchestra with rhythmic whining and ticking sounds produced as tiny oxygen bubbles are released by plants respiring in the hot sun.
  • Using this acoustic method, the presence of species, and a determination of ecological health, can be inferred simply by listening to the natural world without disturbing the environment or harming the plants and animals within it.
    • Sean Nash
      Sean Nash on 11 Jun 24
       
      Here is the obvious value proposition if you could work this out.
  • Publication: Jack A. Greenhalgh, et al., Diel variation in insect-dominated temperate pond soundscapes and guidelines for survey design, Freshwater Biology (2023). DOI: 10.1111/fwb.14092.
    • Sean Nash
      Sean Nash on 11 Jun 24
       
      BEST THING YET: Here is the FULL TEXT of the actual research paper!
    • Sean Nash
      Sean Nash on 11 Jun 24
       
      Here is the FULL TEXT of the actual research paper!
Sean Nash

A new breakthrough in understanding regeneration in a marine worm | ScienceDaily - 0 views

www.sciencedaily.com/...240702135526.htm

shared by Sean Nash on 03 Jul 24 - No Cached
  • The sea worm Platynereis dumerilii is only a few centimetres long but has a remarkable ability: in just a few days, it can regenerate entire parts of its body after an injury or amputation.
    • Sean Nash
      Sean Nash on 03 Jul 24
       
      Trevor Davids used the California blackworm, Lumbriculus variegatus, to examine the effects of titanium dioxide nanoparticles on regeneration rate. Lumbroculus is a freshwater worm and easy to care for.
  • a research team led by a CNRS scientist1 has observed that gut cells play a role in the regeneration of the intestine as well as other tissues such as muscle and epidermis
  • Even more surprising, the team found that this ability of gut cells to regenerate other tissue varies according to their location: the closer they are to the posterior end of the worm, the greater the variety of cell types they can rebuild
  • ...4 more annotations...
  • This was tracked using different markers in particular by fluorescent beads ingested by the worms.
    • Sean Nash
      Sean Nash on 03 Jul 24
       
      This is similar to what Grant Reed was trying to do with painted lady butterflies. He wanted to see the effects of ingesting plastic nanoparticles on their development and regeneration. The smart selection of fluorescent nanoparticles (which we purchased and still have) would allow the tracking of the particles using specialized microscopy.
  • Annelids, or 'segmented worms', which have only been studied in the last 20 years, are an ideal model for the study of regeneration, a process that is widespread in animals but still mysterious for scientists.
  • The research team will continue this work to determine whether cell types, other than gut cells, can play a role in regenerating a variety of cell types.
  • Journal Reference: Loïc Bideau, Zoé Velasquillo-Ramirez, Loeiza Baduel, Marianne Basso, Pascale Gilardi-Hebenstreit, Vanessa Ribes, Michel Vervoort, Eve Gazave. Variations in cell plasticity and proliferation underlie distinct modes of regeneration along the antero-posterior axis in the annelid Platynereis. Development, 2024; 151 (20) DOI: 10.1242/dev.202452
  • Sean Nash on 03 Jul 24
     
    There are elements of this study that connect to what Trevor Davids & Grant Reed were doing last year... but with a different model organism.
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