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This is a free animation site where students or teachers can create animations to show to their class. I've seen other sites, but this is the best combination of easy to use and fun tools. There are various characters, voices and settings.

This page is taken from a 'Teaching Math' blog. The specific entry is an idea that teachers could use to integrate a project into their unit that includes graphing linear equations. The students drew an animal with only straight lines and then had to determine the appropriate equation that matched up with the line drawn. 

Create animations here

atoms, models, drills, animations, and everything else!

Visually appealing learning tool using animated cats

This is an online museum of the Irish Potato Famine. Flash is required. The website is user interactive. The majority of it is animated but the information is interesting and accurate.

This website is an interactive recreation of the Apollo 11 missions. Includes archive pictures, video, audio and animations.