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Mike Chelen

jandot's parp at master - GitHub - 0 views

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    A tool for visualizing abnormal read pairs (i.e. too far apart, forward-forward or reverse-reverse). One of the ways to identify structural variation in a genome is to look at mapping of a read-pair library on a reference genome. Any read-pair (i.e. the ends of the same clone) normally maps in a forward-reverse orientation at a distance from each other that corresponds to the insert size of the clone library. Structural variation between the reference genome used for mapping and the genome used to create the clone library will cause the reads to map in the wrong orientation (i.e. forward-forward or reverse-reverse; indicating an inversion) or at too large or too small a distance (indicating an insertion or deletion in the sample, respectively). pARP basically displays raw read pair mapping data and does not make any assumptions on models as might be required when doing a statistical analysis of the same data. By showing a birds' eye view it helps in interpreting what structural variations are present.
creativebiolabs

Part Ⅱ: Future Bio-pharmaceutical Industry Will be Rewritten by These Ten You... - 0 views

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    At the beginning of 2015, Forbes did a series report of 30 under 30, in which there is 30 under the age of 30 young scientists that are going to change the world". Some of them focus on Physical Medicine, some on discovering new planet, the others are trying to decipher the genomes of human and other creatures.
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