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In a study published today in the Proceedings of the National Academy of Sciences, linguists observed an artificial language evolve from random to ordered, naturally adapting in ways that assured its reproduction.

Primarily, we want to create a new tool that uses the unique features of virtual environments to facilitate education, collaboration, and understanding. The output of many supercomputing applications - from astronomical simulations to medical models - is complex and often highly visual. Creating a persistent, standardized environment where these models can reside will make it easier to share and explore these data sets with other researchers. Also, for educators, ScienceSim will provide an interactive 3-D environment that can be used to explain complex concepts such as gravity in a highly intuitive manner.

ScienceBloggers discuss the advantages of open science and debate the necessity of the current peer-review system.

The three most important aspects of an Open Science model are: 1) Open Access to scientific journals; 2) access to the raw material as Open Data; and 3) access to the transparent Open Process of the research methodologies itself.

Web Science 2009 Journal

This summary was born out of a question on Twitter and percolated to FriendFeed, which was "Who is using RDF and integrating other resources at the minute and what are those resources? From this question, several resources were highlighted

Search and get life science PDFs right away at pubget.com

The National Center for Biomedical Ontology is a consortium of leading biologists, clinicians, informaticians, and ontologists who develop innovative technology and methods allowing scientists to create, disseminate, and manage biomedical information and knowledge in machine-processable form. Our visionis that all biomedical knowledge and data are disseminated on the Internet using principled ontologies, such that they are semantically interoperable and useful for improving biomedical science and clinical care. Our resources include the Open Biomedical Ontologies (OBO) library, the Open Biomedical Data (OBD) repositories, and tools for accessing and using this information in research. The Center collaborates with biomedical researchers conducting Driving Biological Projects to enable outside research and stimulate technology development in the Center. The Center undertakes outreach and educational activities (Biomedical Informatics Program) to train future researchers to use biomedical ontologies and related tools with the goal of enhancing scientific discovery.

Welcome to the biology portal. Biology, from the Greek words bios (life) and the suffix -ology, meaning study of, is a branch of science. It is concerned with the characteristics and behaviors of organisms, how species and individuals come into existence, and the interactions they have with each other and with their environment. Biology encompasses a broad spectrum of academic fields that are often viewed as independent disciplines. Together, they study life over a wide range of scales.

BioForge was created to encourage online collaborations between diverse research groups under BiOS-based licensing schemes. CAMBIA believes that enabling technologies in the life sciences need to remain available to anyone to improve or use in new innovations, both commercial and non-commercial.

RPI's Tetherless World Constellation will address this emerging area of "Web Science," focusing on the World Wide Web and it's future use. Faculty in the constellation will explore the research and engineering principles that underlie the Web, will enhance the Web's reach beyond the desktop and laptop computer, and will develop new technologies and languages that expand the capabilities of the Web. We will use powerful scientific and mathematical techniques from many disciplines to explore the modeling of the Web from network- and information- centric views. Our goals will include making the next generation web natural to use while being responsive to the growing variety of policy and social needs, whether in the area of privacy, intellectual property, general compliance, or provenance. The Tetherless World Constellation will design new techniques to explore social, scientific, and legal impacts of the evolving technologies deployed on the Web.

This is the home page for the National Science Digital Library Metadata Registry. The Metadata Registry provides services to developers and consumers of controlled vocabularies and is one of the first production deployments of the RDF-based Semantic Web Community's Simple Knowledge Organization System (SKOS)

The OBO Foundry is a collaborative experiment involving developers of science-based ontologies who are establishing a set of principles for ontology development with the goal of creating a suite of orthogonal interoperable reference ontologies in the biomedical domain. The groups developing ontologies who have expressed an interest in this goal are listed below, followed by other relevant efforts in this domain.

Invariant study is fundamental to any scientific research, especially when the research domain is as complex as World Wide Web. Invariants are supposed to be constant within the specified research scope. By well understanding the invariants we may effectively improve the knowledge over many complicated issues. Therefore, it is unsurprisingly for us to see the discussion of invariant study in the new Web Science Research Initiative.

The purpose of this chapter is to delineate the key aspects comprising the epistemology that informs my research. It is written as a conversation between myself and three scholars, Ken Wilber, Max van Manen, and Humberto Maturana, each of whom has greatly influenced my thinking regarding the nature of knowing, knowledge, and reality in relation to human science research.

The prototype we describe is a biomedical knowledge base, constructed for a demonstration at Banff WWW2007 , that integrates 15 distinct data sources using currently available Semantic Web technologies such as the W3C standard Web Ontology Language [OWL] and Resource Description Framework [RDF]. This report outlines which resources were integrated, how the knowledge base was constructed using free and open source triple store technology, how it can be queried using the W3C Recommended RDF query language SPARQL [SPARQL], and what resources and inferences are involved in answering complex queries. While the utility of the knowledge base is illustrated by identifying a set of genes involved in Alzheimer's Disease, the approach described here can be applied to any use case that integrates data from multiple domains.

How storytelling communicates complex ideas In this group of pages, some of the underlying mechanisms of storytelling and its relationships to knowledge and knowledge management are revealed: Narrative vs abstract thinking : Jerome Bruner Communications as media : the conventional view of Roman Jakobsen Communications the interactive view : Walter Ong Communications as social flow : David Bohm Stories and archetypes : Carl Jung Engineering vs ecological viewpoints : John Seely Brown Storytelling and the literature of persuasion : Homo vendens Storytelling and genuine persuasion : Storytelling and seduction : Jean Baudrillard Storytelling and openness : de Bono Why isn't storytelling taken seriously? Who's to blame? Why does science despise storytelling? Storytelling and zen: Eastern concepts of knowledge Storytelling and post-modernism: Jean-François Lyotard

The Bio2RDF project is a tool to convert bioinformatics data and knowledge bases to RDF format. It is a kind of generalized rdfizer for bioinformatics applications, and it is a place for the semantic web life science community to develop and grow.

Bringing Wisdom to Emerging Technology We are at an amazing and critical juncture in human history. If we continue on our current path, we face many potential disasters: overpopulation, shortages of water, oil, and raw materials, financial instability, disease, terrorism, war, and the destruction of species and ecosystems (eg. see Jeffrey Sachs "Common Wealth: Economics for a Crowded Planet"). But the next few decades will also bring advances in science and technology which may dramatically improve our lives. It is remarkable that we are simultaneously on the verge of major revolutions in biology, neuroscience, psychology, artificial intelligence, nanotechnology, and fundamental physics.

SenseMaker™ is one of the few software systems to be built on basis of natural rather than management science. It is designed to augment rather than replace human decision making. SenseMaker™ is supported by the open source Cognitive Edge methods and the unique Cognitive Edge Network of consultants, academics and other practitioners across the world. It has the ability to form a bridge between formal structured systems in an organisation and the free tagging of social computing. It enables serendipitous un-biased encounters with data in the context of need.