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Sasicha Manupipatpong

Gene switches do more than flip 'on' or 'off': Can exhibit much more complex binding be... - 1 views

www.sciencedaily.com/...120411131911.htm

genes switch on off more complex

shared by Sasicha Manupipatpong on 16 Apr 12 - No Cached
  • right genes for the job are turned on only in the specific cells where they are needed
  • molecular "clutch" that converts treadmilling to a stable bound state, moving the transcription process forward to completion to turn the gene on
  • act like a switch; they are either "on" (bound to DNA) or "off" (not bound)
  • ...12 more annotations...
  • can exhibit much more complex binding behavior
  • transcription factors' binding process is dynamic and involves more than just being bound or unbound
  • In addition to a stable binding state (on or off)
  • "treadmilling," where no forward transcription process is occurring
  • indicator of whether a gene was turned on or off
  • measure and calculate how long a protein is associated with all of the different genes it regulates
  • proteins that bind in the stable state are associated with high levels of gene transcription
  • if we can regulate the transition between treadmilling and stable binding, we can regulate the outcome in terms of gene expression
  • genetic medicine -- a new way to regulate the 'switches' that turn gene expression associated with disease on or off.
  • measured how long it took the competitor transcription factor to replace the resident protein and used this data to calculate the residence time at each location in the genome
  • specific proteins called "transcription factors" that control which genes are turned on or off in cells by binding to nearby DNA
  • new insights on how cells respond to developmental cues and how they adapt to changing environmental conditions
  • Sasicha Manupipatpong on 16 Apr 12
     
    Genes have been discovered to be more complex than we previously thought--rather than having only on and off states, there is an intermediate state called "treadmilling".
Rafael Chen

New Plant Mutation Produces Tap Root With Large Amounts Of Oil, Proteins, And Starch - 1 views

www.sciencedaily.com/...970707211536.htm

shared by Rafael Chen on 15 Apr 12 - No Cached
  • The discovery could lead to genetically engineered plants that store commercially useful substances in an enlarged root
  • The pickle mutation mimics what happens in seeds, which typically are the major structures accumulating and storing proteins and oil
  • In this mutation the cells destined to become primary root cells retain the character of embryonic cells
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  • They fail to make the switch from embryonic to adult
  • The mutation has its greatest effect when gibberellin is not present during the first 24 hours of growth
  • Rafael Chen on 15 Apr 12
     
    A mutation in plants that makes the tap root accumulate large amounts of oils, proteins, and starch was discovered by scientist, this could lead to genetically engineered plants that store commercially useful substances in an enlarged root.
nidthamsirisup

Mysterious Noncoding DNA: 'Junk' or Genetic Power Player? | PBS NewsHour - 0 views

www.pbs.org/...junk-dna.html

noncoding DNA gene

shared by nidthamsirisup on 15 Apr 12 - No Cached
  • Genes represent only a tiny fraction -- 1 percent -- of our overall genetic material. Then there's the other 99 percent of our DNA -- the stuff that doesn't make protein
  • Researchers have found that some of this noncoding DNA is in fact essential to how our genes function and plays a role in how we look, how we act and the diseases that afflict us.
  • Embedded in this 99 percent is DNA responsible for the mechanics of gene behavior: regulatory DNA. Greg Wray of Duke University's Institute for Genome Sciences and Policy describes the regulatory DNA as the software for our genes, a set of instructions that tells the genome how to use the traditional coding genes.
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  • "It's like a recipe book," Wray said. "It tells you how to make the meal. You need to know the amounts. You need to know the order. The noncoding DNA tells you how much to make, when to make it and under what circumstances."
  • common diseases are probably more influenced by regulatory differences, Harismendy said. These include Type 2 diabetes, Crohn's disease, Alzheimer's Disease and a variety of cancers, including breast, colon, ovarian, prostate and lung.
  • According to Wray, research has shown that diseases like bipolar syndrome and clinical depression may be associated with noncoding mutations that determine whether the brain is producing too much or not enough of a particular neurotransmitter. One noncoding mutation gives a person almost complete protection against the nasty malaria parasite, plasmodium vivax.
  • Another piece of noncoding DNA regulates the enzyme responsible for lactose tolerance, the ability to digest milk. Research by Wray and other scientists has shown that in four populations where dairy consumption is a vital part of the diet, new mutations have appeared that essentially keep the gene that produces the lactase enzyme from switching off.
  • And recent research done by evolutionary biologists suggests that differences in regulatory DNA may represent a major part of what separates us from chimpanzees.
Nickyz P.

We Need More Research On Genetically Altered Salmon Says FDA Advisory Panel - 1 views

www.medicalnewstoday.com/...201862.php

shared by Nickyz P. on 16 Apr 12 - No Cached
  • A panel of experts that advises the US Food and Drug Administration (FDA) decided on Monday more research was needed before it could vote on whether to recommend approval to allow genetically modified salmon to be bred for human consumption in the US.
  • To make the genetically modified Atlantic salmon, they take the growth gene from the Pacific chinook salmon and insert it into the DNA of newly fertilized Atlantic salmon eggs. However, this of itself is not enough to keep the salmon growing all year round: to keep the growth gene permanently "switched on", the AquaBounty scientists also add a small piece of DNA from another fish called the ocean pout.
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