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The Lombok Strait (LS), Ombai Strait (OS), and Timor Passage (TP) are three major outlets of the Indonesian Throughflow to the Indian Ocean. Here, sources and pathways of the LS, OS, and TP outflows are explored by a Lagrangian particle tracking analysis based on a ~3 km regional ocean model simulation. The Makassar Strait transport contributes to ~80%, ~75%, and ~45% of the LS, OS, and TP outflows, respectively. However, ~41% and ~19% of the TP and OS outflows stem from the Lifamatola Passage, which largely feeds the upper and intermediate layers of the outflows. The role of Karimata Strait is quite limited and restricted to the upper layer. It takes 1-2 years and 2-6 years for the Makassar Strait water to reach the OS and TP, respectively, whereas the Lifamatola Passage water passes through the OS (2-6 years) and TP (3-9 years) on a prolonged transit time. In the Banda Sea, the western boundary current is the main pathway toward the OS, while the waters to the TP tend to take a basin interior route.

The southeastern Indian Ocean (SEIO) exhibits prominent decadal variability in sea surface salinity (SSS), showing salinity decreases during 1995-2000 and 2005-2011 and increases during 2000-2005 and after 2011. These salinity changes are linked to the Indo-Pacific climate and have impacts on the regional marine environment. Yet, the underlying mechanism has not been firmly established. In this study, decadal SSS variability of the SEIO is successfully simulated by a high-resolution regional ocean model, and the mechanism is explored through a series of sensitivity experiments. The results suggest that freshwater transport of the Indonesian throughflow (ITF) and local precipitation are two major drivers for the SSS decadal variability. They mutually cause most of the variability, with a generally larger contribution of precipitation. Other processes, such as evaporation and advection driven by local winds, play a minor role. Further analysis shows that the decadal precipitation in the SEIO is mainly associated with the decadal variability of Ningaloo Niño. Ocean dynamic processes significantly modify the relationship between SSS and precipitation, greatly shortening their lag time. The changes in both volume transport and salinity of the ITF water can cause large salinity changes in the SEIO region. Although local wind forcing gives rise to considerable changes in evaporation rate and ocean current advection, its overall contribution to decadal SSS variability is small compared to local precipitation and the ITF.