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It was only a few years ago that Husain Haqqani, a former Pakistani diplomat who recently became ambassador to Washington, wrote a brilliant book arguing that the Pakistani government—despite public and private claims to the contrary—continued "to make a distinction between 'terrorists' … and 'freedom fighters' (the officially preferred label … for Kashmiri militants)." He added: "The Musharraf government also remains tolerant of remnants of Afghanistan's Taliban regime, hoping to use them in resuscitating Pakistan's influence in Afghanistan." The Pakistani military's world view—that it is surrounded by dangers and needs to be active in destabilizing its neighbors— remains central to Pakistan's basic strategy.

While President Musharraf broke with the overt and large-scale support that the military provides to the militant groups, and there have continued to be some moves against some jihadists, there is no evidence of a campaign to rid Pakistan of these groups. The leaders of the Afghan Taliban, headed up by Mullah Mohammed Omar, still work actively out of Quetta. The Army has never launched serious campaigns against the main Taliban-allied groups led by Gulbuddin Hekmatyar or Jalaluddin Haqqani, both of whose networks are active in Pakistan. The group responsible for the Mumbai attacks, Lashkar-e-Taiba, has evaded any punishment, morphing in name and form but still operating in plain sight in Lahore. Even now, after allowing the Taliban to get within 60 miles of the capital, the Pakistani military has deployed only a few thousand troops to confront them, leaving the bulk of its million-man Army in the east, presumably in case India suddenly invades.

The rise of Islamic militants in Pakistan is not, Ambassador Haqqani writes, "the inadvertent outcome of some governments." It is "rooted in history and [is] a consistent policy of the Pakistani state." The author describes how, from its early years, the Pakistani military developed "a strategic commitment to jihadi ideology." It used Islam to mobilize the country and Army in every conflict with India. A textbook case was the 1965 war, when Pakistan's state-controlled media "generated a frenzy of jihad," complete with stories of heroic suicide missions, martyrdom and divine help.